Gene : Glyma.03G254700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21668 - EIF-1A Genomic Order:  2547
Name:  ? Glyma.03G254700 Secondary Identifier:  ? PAC:30516922
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G254700 0.5kb upstream 0.5kb upstream 2877 true Chr03: 44989615-44992491 Glycine max
Glyma.03G254700 0.5kb upstream 0.5kb upstream 500 false Chr03: 44991992-44992491 Glycine max
Glyma.03G254700 0.5kb downstream 0.5kb downstream 2877 true Chr03: 44989115-44991991 Glycine max
Glyma.03G254700 0.5kb downstream 0.5kb downstream 500 false Chr03: 44989115-44989614 Glycine max
Glyma.03G254700 1.0kb upstream 1.0kb upstream 3377 true Chr03: 44989615-44992991 Glycine max
Glyma.03G254700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44991992-44992991 Glycine max
Glyma.03G254700 1.0kb downstream 1.0kb downstream 3377 true Chr03: 44988615-44991991 Glycine max
Glyma.03G254700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44988615-44989614 Glycine max
Glyma.03G254700 2.0kb upstream 2.0kb upstream 4377 true Chr03: 44989615-44993991 Glycine max
Glyma.03G254700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44991992-44993991 Glycine max
Glyma.03G254700 2.0kb downstream 2.0kb downstream 4377 true Chr03: 44987615-44991991 Glycine max
Glyma.03G254700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44987615-44989614 Glycine max
Glyma.03G254700 5.0kb upstream 5.0kb upstream 7377 true Chr03: 44989615-44996991 Glycine max
Glyma.03G254700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44991992-44996991 Glycine max
Glyma.03G254700 5.0kb downstream 5.0kb downstream 7377 true Chr03: 44984615-44991991 Glycine max
Glyma.03G254700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44984615-44989614 Glycine max
Glyma.03G254700 10.0kb upstream 10.0kb upstream 12377 true Chr03: 44989615-45001991 Glycine max
Glyma.03G254700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44991992-45001991 Glycine max
Glyma.03G254700 10.0kb downstream 10.0kb downstream 12377 true Chr03: 44979615-44991991 Glycine max
Glyma.03G254700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44979615-44989614 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254109 5265 Fabidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.2838 0.0 79.7328 High  
cufflinks 20.3526 0.0 54.4578 High Low
cufflinks 24.8338 0.0 67.08 High  
cufflinks 20.7106 0.0 55.4582 High Low
cufflinks 32.4011 0.0 88.9206 High High
cufflinks 27.842 0.0 75.6222 High  
cufflinks 23.8739 0.0 64.2522 High  
cufflinks 30.9738 0.0 84.5032 High High
cufflinks 24.9213 0.0 67.2237 High  
cufflinks 19.845     High High
cufflinks 7.965     High Low
cufflinks 17.073     High  
cufflinks 21.969     High High
cufflinks 25.229     High High
cufflinks 6.781     High Low
cufflinks 14.735     High  
cufflinks 13.318     High  
cufflinks 14.621     High  
cufflinks 17.947     High  
cufflinks 12.447     High  
cufflinks 7.36     High Low
cufflinks 14.049     High  
cufflinks 15.803     High  
cufflinks 11.776     High  
cufflinks 13.187     High  
cufflinks 11.373     High  

0 Strain