Gene : Glyma.03G258900 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.3.1.135 - Phosphatidylcholine--retinol O-acyltransferase / Retinyl ester synthase Genomic Order:  2589
Name:  ? Glyma.03G258900 Secondary Identifier:  ? PAC:30517172
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G258900 0.5kb upstream 0.5kb upstream 4261 true Chr03: 45323059-45327319 Glycine max
Glyma.03G258900 0.5kb upstream 0.5kb upstream 500 false Chr03: 45326820-45327319 Glycine max
Glyma.03G258900 0.5kb downstream 0.5kb downstream 4261 true Chr03: 45322559-45326819 Glycine max
Glyma.03G258900 0.5kb downstream 0.5kb downstream 500 false Chr03: 45322559-45323058 Glycine max
Glyma.03G258900 1.0kb upstream 1.0kb upstream 4761 true Chr03: 45323059-45327819 Glycine max
Glyma.03G258900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45326820-45327819 Glycine max
Glyma.03G258900 1.0kb downstream 1.0kb downstream 4761 true Chr03: 45322059-45326819 Glycine max
Glyma.03G258900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45322059-45323058 Glycine max
Glyma.03G258900 2.0kb upstream 2.0kb upstream 5761 true Chr03: 45323059-45328819 Glycine max
Glyma.03G258900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45326820-45328819 Glycine max
Glyma.03G258900 2.0kb downstream 2.0kb downstream 5761 true Chr03: 45321059-45326819 Glycine max
Glyma.03G258900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45321059-45323058 Glycine max
Glyma.03G258900 5.0kb upstream 5.0kb upstream 8761 true Chr03: 45323059-45331819 Glycine max
Glyma.03G258900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45326820-45331819 Glycine max
Glyma.03G258900 5.0kb downstream 5.0kb downstream 8761 true Chr03: 45318059-45326819 Glycine max
Glyma.03G258900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45318059-45323058 Glycine max
Glyma.03G258900 10.0kb upstream 10.0kb upstream 13761 true Chr03: 45323059-45336819 Glycine max
Glyma.03G258900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45326820-45336819 Glycine max
Glyma.03G258900 10.0kb downstream 10.0kb downstream 13761 true Chr03: 45313059-45326819 Glycine max
Glyma.03G258900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45313059-45323058 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302826 5265 Fabidae View MSA
124060781 5270 Rosid View MSA
123746074 5271 Pentapetalae View MSA
122790931 5272 Eudicot View MSA
122046172 5273 Angiosperm View MSA
121351388 5274 Embryophyte View MSA
123382148 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.52268 0.0 5.23956   Low
cufflinks 15.4017 0.0 41.2339    
cufflinks 3.73509 0.0 11.3359   Low
cufflinks 11.0479 0.0 29.9841    
cufflinks 11.8628 0.0 32.1243    
cufflinks 11.5165 0.0 31.1926    
cufflinks 11.4894 0.0 31.1704    
cufflinks 26.0105 0.0 69.6842 High High
cufflinks 10.8712 0.0 29.5404    
cufflinks 12.388     High High
cufflinks 0.61       Low
cufflinks 3.729        
cufflinks 7.581     High  
cufflinks 5.978        
cufflinks 0.68       Low
cufflinks 5.887        
cufflinks 2.411        
cufflinks 8.445     High  
cufflinks 8.461     High  
cufflinks 5.607        
cufflinks 1.413        
cufflinks 5.983        
cufflinks 8.065     High  
cufflinks 0.607       Low
cufflinks 5.583        
cufflinks 2.045        

0 Strain