Gene : Glyma.19G125400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  1254
Name:  ? Glyma.19G125400 Secondary Identifier:  ? PAC:30513142
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G125400 0.5kb upstream 0.5kb upstream 3381 true Chr19: 38371477-38374857 Glycine max
Glyma.19G125400 0.5kb upstream 0.5kb upstream 500 false Chr19: 38374358-38374857 Glycine max
Glyma.19G125400 0.5kb downstream 0.5kb downstream 3381 true Chr19: 38370977-38374357 Glycine max
Glyma.19G125400 0.5kb downstream 0.5kb downstream 500 false Chr19: 38370977-38371476 Glycine max
Glyma.19G125400 1.0kb upstream 1.0kb upstream 3881 true Chr19: 38371477-38375357 Glycine max
Glyma.19G125400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38374358-38375357 Glycine max
Glyma.19G125400 1.0kb downstream 1.0kb downstream 3881 true Chr19: 38370477-38374357 Glycine max
Glyma.19G125400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38370477-38371476 Glycine max
Glyma.19G125400 2.0kb upstream 2.0kb upstream 4881 true Chr19: 38371477-38376357 Glycine max
Glyma.19G125400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38374358-38376357 Glycine max
Glyma.19G125400 2.0kb downstream 2.0kb downstream 4881 true Chr19: 38369477-38374357 Glycine max
Glyma.19G125400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38369477-38371476 Glycine max
Glyma.19G125400 5.0kb upstream 5.0kb upstream 7881 true Chr19: 38371477-38379357 Glycine max
Glyma.19G125400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38374358-38379357 Glycine max
Glyma.19G125400 5.0kb downstream 5.0kb downstream 7881 true Chr19: 38366477-38374357 Glycine max
Glyma.19G125400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38366477-38371476 Glycine max
Glyma.19G125400 10.0kb upstream 10.0kb upstream 12881 true Chr19: 38371477-38384357 Glycine max
Glyma.19G125400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38374358-38384357 Glycine max
Glyma.19G125400 10.0kb downstream 10.0kb downstream 12881 true Chr19: 38361477-38374357 Glycine max
Glyma.19G125400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38361477-38371476 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300476 5265 Fabidae View MSA
124073209 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4005 0.0 83.7988 High  
cufflinks 33.961 0.0 90.7449 High  
cufflinks 12.2697 0.0 33.8764   Low
cufflinks 22.5918 0.0 60.4314 High  
cufflinks 53.1853 0.0 144.728 High High
cufflinks 45.8592 0.0 123.713 High  
cufflinks 28.0245 0.0 74.7751 High  
cufflinks 32.7247 0.0 87.4149 High  
cufflinks 36.5003 0.0 97.6866 High  
cufflinks 11.785     High  
cufflinks 3.051       Low
cufflinks 8.063     High  
cufflinks 25.93     High High
cufflinks 36.516     High High
cufflinks 2.786       Low
cufflinks 7.203     High  
cufflinks 8.185     High  
cufflinks 8.952     High  
cufflinks 10.174     High  
cufflinks 4.789        
cufflinks 5.301        
cufflinks 5.776        
cufflinks 8.534     High  
cufflinks 4.256        
cufflinks 6.024        
cufflinks 7.655     High  

0 Strain