Gene : Glyma.19G125500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  1255
Name:  ? Glyma.19G125500 Secondary Identifier:  ? PAC:30514427
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G125500 0.5kb upstream 0.5kb upstream 3386 true Chr19: 38378074-38381459 Glycine max
Glyma.19G125500 0.5kb upstream 0.5kb upstream 500 false Chr19: 38380960-38381459 Glycine max
Glyma.19G125500 0.5kb downstream 0.5kb downstream 3386 true Chr19: 38377574-38380959 Glycine max
Glyma.19G125500 0.5kb downstream 0.5kb downstream 500 false Chr19: 38377574-38378073 Glycine max
Glyma.19G125500 1.0kb upstream 1.0kb upstream 3886 true Chr19: 38378074-38381959 Glycine max
Glyma.19G125500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 38380960-38381959 Glycine max
Glyma.19G125500 1.0kb downstream 1.0kb downstream 3886 true Chr19: 38377074-38380959 Glycine max
Glyma.19G125500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 38377074-38378073 Glycine max
Glyma.19G125500 2.0kb upstream 2.0kb upstream 4886 true Chr19: 38378074-38382959 Glycine max
Glyma.19G125500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 38380960-38382959 Glycine max
Glyma.19G125500 2.0kb downstream 2.0kb downstream 4886 true Chr19: 38376074-38380959 Glycine max
Glyma.19G125500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 38376074-38378073 Glycine max
Glyma.19G125500 5.0kb upstream 5.0kb upstream 7886 true Chr19: 38378074-38385959 Glycine max
Glyma.19G125500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 38380960-38385959 Glycine max
Glyma.19G125500 5.0kb downstream 5.0kb downstream 7886 true Chr19: 38373074-38380959 Glycine max
Glyma.19G125500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 38373074-38378073 Glycine max
Glyma.19G125500 10.0kb upstream 10.0kb upstream 12886 true Chr19: 38378074-38390959 Glycine max
Glyma.19G125500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 38380960-38390959 Glycine max
Glyma.19G125500 10.0kb downstream 10.0kb downstream 12886 true Chr19: 38368074-38380959 Glycine max
Glyma.19G125500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 38368074-38378073 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247578 5265 Fabidae Singleton cluster - no MSA
123991317 5270 Rosid Singleton cluster - no MSA
123566278 5271 Pentapetalae Singleton cluster - no MSA
122601038 5272 Eudicot Singleton cluster - no MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.072 0.0 143.189 High  
cufflinks 58.5749 0.0 213.476 High  
cufflinks 26.4735 0.0 92.1701 High Low
cufflinks 42.1143 0.0 148.356 High  
cufflinks 73.1899 0.0 279.388 High High
cufflinks 62.4129 0.0 196.965 High  
cufflinks 49.1989 0.0 176.279 High  
cufflinks 51.9066 0.0 186.011 High  
cufflinks 50.5413 0.0 180.692 High  
cufflinks 7.942     High  
cufflinks 1.82       Low
cufflinks 5.361        
cufflinks 15.484     High High
cufflinks 22.112     High High
cufflinks 1.628       Low
cufflinks 5.973        
cufflinks 5.054        
cufflinks 6.176        
cufflinks 8.55     High  
cufflinks 3.801        
cufflinks 3.344        
cufflinks 4.894        
cufflinks 7.189        
cufflinks 2.662       Low
cufflinks 5.076        
cufflinks 4.76        

0 Strain