Gene : Glyma.19G113700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22870:SF175 - ANKYRIN REPEAT AND REGULATOR OF CHROMOSOME CONDENSATION (RCC1) DOMAIN-CONTAINING PROTEIN Genomic Order:  1137
Name:  ? Glyma.19G113700 Secondary Identifier:  ? PAC:30511305
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G113700 0.5kb upstream 0.5kb upstream 10849 true Chr19: 36843471-36854319 Glycine max
Glyma.19G113700 0.5kb upstream 0.5kb upstream 500 false Chr19: 36853820-36854319 Glycine max
Glyma.19G113700 0.5kb downstream 0.5kb downstream 10849 true Chr19: 36842971-36853819 Glycine max
Glyma.19G113700 0.5kb downstream 0.5kb downstream 500 false Chr19: 36842971-36843470 Glycine max
Glyma.19G113700 1.0kb upstream 1.0kb upstream 11349 true Chr19: 36843471-36854819 Glycine max
Glyma.19G113700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 36853820-36854819 Glycine max
Glyma.19G113700 1.0kb downstream 1.0kb downstream 11349 true Chr19: 36842471-36853819 Glycine max
Glyma.19G113700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 36842471-36843470 Glycine max
Glyma.19G113700 2.0kb upstream 2.0kb upstream 12349 true Chr19: 36843471-36855819 Glycine max
Glyma.19G113700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 36853820-36855819 Glycine max
Glyma.19G113700 2.0kb downstream 2.0kb downstream 12349 true Chr19: 36841471-36853819 Glycine max
Glyma.19G113700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 36841471-36843470 Glycine max
Glyma.19G113700 5.0kb upstream 5.0kb upstream 15349 true Chr19: 36843471-36858819 Glycine max
Glyma.19G113700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 36853820-36858819 Glycine max
Glyma.19G113700 5.0kb downstream 5.0kb downstream 15349 true Chr19: 36838471-36853819 Glycine max
Glyma.19G113700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 36838471-36843470 Glycine max
Glyma.19G113700 10.0kb upstream 10.0kb upstream 20349 true Chr19: 36843471-36863819 Glycine max
Glyma.19G113700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 36853820-36863819 Glycine max
Glyma.19G113700 10.0kb downstream 10.0kb downstream 20349 true Chr19: 36833471-36853819 Glycine max
Glyma.19G113700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 36833471-36843470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301338 5265 Fabidae View MSA
124061944 5270 Rosid View MSA
123736437 5271 Pentapetalae View MSA
122786793 5272 Eudicot View MSA
122044253 5273 Angiosperm View MSA
121345534 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.19967 0.0 26.6693    
cufflinks 4.88201 0.0 21.1507    
cufflinks 6.13621 0.0 25.5298    
cufflinks 8.14003 0.0 33.9393    
cufflinks 3.22646 0.0 14.8063    
cufflinks 4.23265 0.0 14.8297    
cufflinks 19.7546 0.0 87.4451   High
cufflinks 3.60128 0.0 15.7083    
cufflinks 3.28744 0.0 11.845    
cufflinks 0.533        
cufflinks 0.464        
cufflinks 0.814       High
cufflinks 0.606        
cufflinks 0.476        
cufflinks 0.421       Low
cufflinks 0.775        
cufflinks 0.365       Low
cufflinks 0.852       High
cufflinks 0.833       High
cufflinks 0.703        
cufflinks 0.404       Low
cufflinks 0.861       High
cufflinks 0.68        
cufflinks 0.511        
cufflinks 0.739        
cufflinks 0.419       Low

0 Strain