Gene : Glyma.03G207700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10769 - 40S RIBOSOMAL PROTEIN S28 Genomic Order:  2077
Name:  ? Glyma.03G207700 Secondary Identifier:  ? PAC:30517472
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G207700 0.5kb upstream 0.5kb upstream 1859 true Chr03: 41505394-41507252 Glycine max
Glyma.03G207700 0.5kb upstream 0.5kb upstream 500 false Chr03: 41505394-41505893 Glycine max
Glyma.03G207700 0.5kb downstream 0.5kb downstream 1859 true Chr03: 41505894-41507752 Glycine max
Glyma.03G207700 0.5kb downstream 0.5kb downstream 500 false Chr03: 41507253-41507752 Glycine max
Glyma.03G207700 1.0kb upstream 1.0kb upstream 2359 true Chr03: 41504894-41507252 Glycine max
Glyma.03G207700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41504894-41505893 Glycine max
Glyma.03G207700 1.0kb downstream 1.0kb downstream 2359 true Chr03: 41505894-41508252 Glycine max
Glyma.03G207700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41507253-41508252 Glycine max
Glyma.03G207700 2.0kb upstream 2.0kb upstream 3359 true Chr03: 41503894-41507252 Glycine max
Glyma.03G207700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41503894-41505893 Glycine max
Glyma.03G207700 2.0kb downstream 2.0kb downstream 3359 true Chr03: 41505894-41509252 Glycine max
Glyma.03G207700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41507253-41509252 Glycine max
Glyma.03G207700 5.0kb upstream 5.0kb upstream 6359 true Chr03: 41500894-41507252 Glycine max
Glyma.03G207700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41500894-41505893 Glycine max
Glyma.03G207700 5.0kb downstream 5.0kb downstream 6359 true Chr03: 41505894-41512252 Glycine max
Glyma.03G207700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41507253-41512252 Glycine max
Glyma.03G207700 10.0kb upstream 10.0kb upstream 11359 true Chr03: 41495894-41507252 Glycine max
Glyma.03G207700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41495894-41505893 Glycine max
Glyma.03G207700 10.0kb downstream 10.0kb downstream 11359 true Chr03: 41505894-41517252 Glycine max
Glyma.03G207700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41507253-41517252 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026233 5273 Angiosperm View MSA
122309148 5265 Fabidae View MSA
124062378 5270 Rosid View MSA
123752334 5271 Pentapetalae View MSA
122796938 5272 Eudicot View MSA
121351383 5274 Embryophyte View MSA
123425094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.7774 0.0 144.864 High Low
cufflinks 84.2758 0.0 224.855 High  
cufflinks 46.281 0.0 125.254 High Low
cufflinks 53.7545 0.0 144.57 High Low
cufflinks 154.961 0.0 423.24 High High
cufflinks 127.615 0.0 344.014 High  
cufflinks 166.824 0.0 457.505 High High
cufflinks 89.4954 0.0 238.946 High  
cufflinks 91.1485 0.0 243.42 High  
cufflinks 24.138     High  
cufflinks 8.398     High  
cufflinks 23.954     High  
cufflinks 70.57     High High
cufflinks 109.664     High High
cufflinks 5.107       Low
cufflinks 12.874     High  
cufflinks 19.004     High  
cufflinks 25.189     High  
cufflinks 25.725     High  
cufflinks 9.307     High  
cufflinks 12.682     High  
cufflinks 10.748     High  
cufflinks 15.667     High  
cufflinks 10.735     High  
cufflinks 13.241     High  
cufflinks 14.996     High  

0 Strain