Gene : Glyma.03G208500 G. max Wm82.a2.v1
Defline:  (1 of 11) KOG0144 - RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  2085
Name:  ? Glyma.03G208500 Secondary Identifier:  ? PAC:30519205
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G208500 0.5kb upstream 0.5kb upstream 5843 true Chr03: 41536823-41542665 Glycine max
Glyma.03G208500 0.5kb upstream 0.5kb upstream 500 false Chr03: 41542166-41542665 Glycine max
Glyma.03G208500 0.5kb downstream 0.5kb downstream 5843 true Chr03: 41536323-41542165 Glycine max
Glyma.03G208500 0.5kb downstream 0.5kb downstream 500 false Chr03: 41536323-41536822 Glycine max
Glyma.03G208500 1.0kb upstream 1.0kb upstream 6343 true Chr03: 41536823-41543165 Glycine max
Glyma.03G208500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41542166-41543165 Glycine max
Glyma.03G208500 1.0kb downstream 1.0kb downstream 6343 true Chr03: 41535823-41542165 Glycine max
Glyma.03G208500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41535823-41536822 Glycine max
Glyma.03G208500 2.0kb upstream 2.0kb upstream 7343 true Chr03: 41536823-41544165 Glycine max
Glyma.03G208500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41542166-41544165 Glycine max
Glyma.03G208500 2.0kb downstream 2.0kb downstream 7343 true Chr03: 41534823-41542165 Glycine max
Glyma.03G208500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41534823-41536822 Glycine max
Glyma.03G208500 5.0kb upstream 5.0kb upstream 10343 true Chr03: 41536823-41547165 Glycine max
Glyma.03G208500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41542166-41547165 Glycine max
Glyma.03G208500 5.0kb downstream 5.0kb downstream 10343 true Chr03: 41531823-41542165 Glycine max
Glyma.03G208500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41531823-41536822 Glycine max
Glyma.03G208500 10.0kb upstream 10.0kb upstream 15343 true Chr03: 41536823-41552165 Glycine max
Glyma.03G208500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41542166-41552165 Glycine max
Glyma.03G208500 10.0kb downstream 10.0kb downstream 15343 true Chr03: 41526823-41542165 Glycine max
Glyma.03G208500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41526823-41536822 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300167 5265 Fabidae View MSA
124062995 5270 Rosid View MSA
123747202 5271 Pentapetalae View MSA
122791871 5272 Eudicot View MSA
122044702 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349683 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.68601 0.0 29.0707    
cufflinks 6.59132 0.0 25.8481    
cufflinks 11.1674 0.0 33.9959    
cufflinks 4.69683 0.0 20.1541   Low
cufflinks 9.76543 0.0 35.2385    
cufflinks 19.6048 0.0 58.0681   High
cufflinks 4.59548 0.0 16.7111   Low
cufflinks 6.96754 0.0 26.9486    
cufflinks 8.0486 0.0 30.2596    
cufflinks 2.813        
cufflinks 3.271        
cufflinks 1.895       Low
cufflinks 2.965        
cufflinks 3.171        
cufflinks 1.875       Low
cufflinks 3.173        
cufflinks 4.015       High
cufflinks 1.897       Low
cufflinks 1.589       Low
cufflinks 2.793        
cufflinks 4.53       High
cufflinks 2.675        
cufflinks 2.601        
cufflinks 3.556        
cufflinks 2.716        
cufflinks 3.48        

0 Strain