Gene : Glyma.03G207000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14969:SF3 - DIHYDROSPHINGOSINE 1-PHOSPHATE PHOSPHATASE LCB3-RELATED Genomic Order:  2070
Name:  ? Glyma.03G207000 Secondary Identifier:  ? PAC:30519239
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRIGLSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G207000 0.5kb upstream 0.5kb upstream 4941 true Chr03: 41448701-41453641 Glycine max
Glyma.03G207000 0.5kb upstream 0.5kb upstream 500 false Chr03: 41453142-41453641 Glycine max
Glyma.03G207000 0.5kb downstream 0.5kb downstream 4941 true Chr03: 41448201-41453141 Glycine max
Glyma.03G207000 0.5kb downstream 0.5kb downstream 500 false Chr03: 41448201-41448700 Glycine max
Glyma.03G207000 1.0kb upstream 1.0kb upstream 5441 true Chr03: 41448701-41454141 Glycine max
Glyma.03G207000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41453142-41454141 Glycine max
Glyma.03G207000 1.0kb downstream 1.0kb downstream 5441 true Chr03: 41447701-41453141 Glycine max
Glyma.03G207000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41447701-41448700 Glycine max
Glyma.03G207000 2.0kb upstream 2.0kb upstream 6441 true Chr03: 41448701-41455141 Glycine max
Glyma.03G207000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41453142-41455141 Glycine max
Glyma.03G207000 2.0kb downstream 2.0kb downstream 6441 true Chr03: 41446701-41453141 Glycine max
Glyma.03G207000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41446701-41448700 Glycine max
Glyma.03G207000 5.0kb upstream 5.0kb upstream 9441 true Chr03: 41448701-41458141 Glycine max
Glyma.03G207000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41453142-41458141 Glycine max
Glyma.03G207000 5.0kb downstream 5.0kb downstream 9441 true Chr03: 41443701-41453141 Glycine max
Glyma.03G207000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41443701-41448700 Glycine max
Glyma.03G207000 10.0kb upstream 10.0kb upstream 14441 true Chr03: 41448701-41463141 Glycine max
Glyma.03G207000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41453142-41463141 Glycine max
Glyma.03G207000 10.0kb downstream 10.0kb downstream 14441 true Chr03: 41438701-41453141 Glycine max
Glyma.03G207000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41438701-41448700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309105 5265 Fabidae View MSA
124061101 5270 Rosid View MSA
123739708 5271 Pentapetalae View MSA
122787223 5272 Eudicot View MSA
122041787 5273 Angiosperm View MSA
121351488 5274 Embryophyte View MSA
123382186 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.25821 0.0 23.2757    
cufflinks 7.80046 0.0 22.1069    
cufflinks 6.22046 0.0 18.0538    
cufflinks 6.92587 0.0 19.8763    
cufflinks 5.92334 0.0 17.3676    
cufflinks 11.1832 0.0 30.6404   High
cufflinks 4.75794 0.0 14.3631   Low
cufflinks 7.07341 0.0 20.2478    
cufflinks 5.633 0.0 16.5772    
cufflinks 1.602        
cufflinks 2.279        
cufflinks 1.981        
cufflinks 1.563        
cufflinks 0.961       Low
cufflinks 0.988       Low
cufflinks 2.412        
cufflinks 3.651       High
cufflinks 3.458       High
cufflinks 2.863        
cufflinks 2.591        
cufflinks 2.415        
cufflinks 2.703        
cufflinks 1.801        
cufflinks 3.13        
cufflinks 2.394        
cufflinks 2.616        

0 Strain