Gene : Glyma.03G205800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10769 - 40S RIBOSOMAL PROTEIN S28 Genomic Order:  2058
Name:  ? Glyma.03G205800 Secondary Identifier:  ? PAC:30516589
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G205800 0.5kb upstream 0.5kb upstream 1966 true Chr03: 41370360-41372325 Glycine max
Glyma.03G205800 0.5kb upstream 0.5kb upstream 500 false Chr03: 41371826-41372325 Glycine max
Glyma.03G205800 0.5kb downstream 0.5kb downstream 1966 true Chr03: 41369860-41371825 Glycine max
Glyma.03G205800 0.5kb downstream 0.5kb downstream 500 false Chr03: 41369860-41370359 Glycine max
Glyma.03G205800 1.0kb upstream 1.0kb upstream 2466 true Chr03: 41370360-41372825 Glycine max
Glyma.03G205800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41371826-41372825 Glycine max
Glyma.03G205800 1.0kb downstream 1.0kb downstream 2466 true Chr03: 41369360-41371825 Glycine max
Glyma.03G205800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41369360-41370359 Glycine max
Glyma.03G205800 2.0kb upstream 2.0kb upstream 3466 true Chr03: 41370360-41373825 Glycine max
Glyma.03G205800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41371826-41373825 Glycine max
Glyma.03G205800 2.0kb downstream 2.0kb downstream 3466 true Chr03: 41368360-41371825 Glycine max
Glyma.03G205800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41368360-41370359 Glycine max
Glyma.03G205800 5.0kb upstream 5.0kb upstream 6466 true Chr03: 41370360-41376825 Glycine max
Glyma.03G205800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41371826-41376825 Glycine max
Glyma.03G205800 5.0kb downstream 5.0kb downstream 6466 true Chr03: 41365360-41371825 Glycine max
Glyma.03G205800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41365360-41370359 Glycine max
Glyma.03G205800 10.0kb upstream 10.0kb upstream 11466 true Chr03: 41370360-41381825 Glycine max
Glyma.03G205800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41371826-41381825 Glycine max
Glyma.03G205800 10.0kb downstream 10.0kb downstream 11466 true Chr03: 41360360-41371825 Glycine max
Glyma.03G205800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41360360-41370359 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026233 5273 Angiosperm View MSA
122309148 5265 Fabidae View MSA
124062378 5270 Rosid View MSA
123752334 5271 Pentapetalae View MSA
122796938 5272 Eudicot View MSA
121351383 5274 Embryophyte View MSA
123425094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.6453 0.0 231.667 High  
cufflinks 93.138 0.0 249.658 High  
cufflinks 61.8871 0.0 165.165 High Low
cufflinks 44.8644 0.0 120.784 High Low
cufflinks 195.259 0.0 552.452 High High
cufflinks 175.946 0.0 491.886 High  
cufflinks 203.254 0.0 576.903 High High
cufflinks 102.601 0.0 276.175 High  
cufflinks 141.176 0.0 387.45 High  
cufflinks 48.235     High  
cufflinks 32.395     High  
cufflinks 42.947     High  
cufflinks 160.275     High High
cufflinks 256.961     High High
cufflinks 29.93     High Low
cufflinks 59.12     High  
cufflinks 45.372     High  
cufflinks 46.139     High  
cufflinks 52.212     High  
cufflinks 43.932     High  
cufflinks 45.55     High  
cufflinks 42.808     High  
cufflinks 50.347     High  
cufflinks 35.45     High  
cufflinks 61.062     High  
cufflinks 55.891     High  

0 Strain