Gene : Glyma.03G205600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10627//PTHR10627:SF43 - SCP160 Genomic Order:  2056
Name:  ? Glyma.03G205600 Secondary Identifier:  ? PAC:30518897
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G205600 0.5kb upstream 0.5kb upstream 2763 true Chr03: 41363118-41365880 Glycine max
Glyma.03G205600 0.5kb upstream 0.5kb upstream 500 false Chr03: 41363118-41363617 Glycine max
Glyma.03G205600 0.5kb downstream 0.5kb downstream 2763 true Chr03: 41363618-41366380 Glycine max
Glyma.03G205600 0.5kb downstream 0.5kb downstream 500 false Chr03: 41365881-41366380 Glycine max
Glyma.03G205600 1.0kb upstream 1.0kb upstream 3263 true Chr03: 41362618-41365880 Glycine max
Glyma.03G205600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41362618-41363617 Glycine max
Glyma.03G205600 1.0kb downstream 1.0kb downstream 3263 true Chr03: 41363618-41366880 Glycine max
Glyma.03G205600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41365881-41366880 Glycine max
Glyma.03G205600 2.0kb upstream 2.0kb upstream 4263 true Chr03: 41361618-41365880 Glycine max
Glyma.03G205600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41361618-41363617 Glycine max
Glyma.03G205600 2.0kb downstream 2.0kb downstream 4263 true Chr03: 41363618-41367880 Glycine max
Glyma.03G205600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41365881-41367880 Glycine max
Glyma.03G205600 5.0kb upstream 5.0kb upstream 7263 true Chr03: 41358618-41365880 Glycine max
Glyma.03G205600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41358618-41363617 Glycine max
Glyma.03G205600 5.0kb downstream 5.0kb downstream 7263 true Chr03: 41363618-41370880 Glycine max
Glyma.03G205600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41365881-41370880 Glycine max
Glyma.03G205600 10.0kb upstream 10.0kb upstream 12263 true Chr03: 41353618-41365880 Glycine max
Glyma.03G205600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41353618-41363617 Glycine max
Glyma.03G205600 10.0kb downstream 10.0kb downstream 12263 true Chr03: 41363618-41375880 Glycine max
Glyma.03G205600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41365881-41375880 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305870 5265 Fabidae View MSA
124070346 5270 Rosid View MSA
123742337 5271 Pentapetalae View MSA
122794270 5272 Eudicot View MSA
122048117 5273 Angiosperm View MSA
121310853 5274 Embryophyte View MSA
123348238 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.20132 0.0 13.1959    
cufflinks 5.70195 0.0 17.1387    
cufflinks 4.30403 0.0 13.4428    
cufflinks 6.13465 0.0 18.2007    
cufflinks 3.05476 0.0 10.0026   Low
cufflinks 3.63328 0.0 11.6337    
cufflinks 8.4637 0.0 24.1905   High
cufflinks 6.56623 0.0 19.2993    
cufflinks 4.26143 0.0 13.3202    
cufflinks 1.611        
cufflinks 1.879        
cufflinks 2.115        
cufflinks 1.284       Low
cufflinks 1.337       Low
cufflinks 1.276       Low
cufflinks 2.641       High
cufflinks 1.96        
cufflinks 1.961        
cufflinks 2.552       High
cufflinks 2.209        
cufflinks 1.897        
cufflinks 2.379        
cufflinks 2.072        
cufflinks 1.972        
cufflinks 2.47       High
cufflinks 2.361        

0 Strain