Gene : Glyma.19G115100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12124:SF47 - EXOSOME COMPONENT 10 Genomic Order:  1151
Name:  ? Glyma.19G115100 Secondary Identifier:  ? PAC:30514624
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G115100 0.5kb upstream 0.5kb upstream 21081 true Chr19: 37017251-37038331 Glycine max
Glyma.19G115100 0.5kb upstream 0.5kb upstream 500 false Chr19: 37017251-37017750 Glycine max
Glyma.19G115100 0.5kb downstream 0.5kb downstream 21081 true Chr19: 37017751-37038831 Glycine max
Glyma.19G115100 0.5kb downstream 0.5kb downstream 500 false Chr19: 37038332-37038831 Glycine max
Glyma.19G115100 1.0kb upstream 1.0kb upstream 21581 true Chr19: 37016751-37038331 Glycine max
Glyma.19G115100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37016751-37017750 Glycine max
Glyma.19G115100 1.0kb downstream 1.0kb downstream 21581 true Chr19: 37017751-37039331 Glycine max
Glyma.19G115100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37038332-37039331 Glycine max
Glyma.19G115100 2.0kb upstream 2.0kb upstream 22581 true Chr19: 37015751-37038331 Glycine max
Glyma.19G115100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37015751-37017750 Glycine max
Glyma.19G115100 2.0kb downstream 2.0kb downstream 22581 true Chr19: 37017751-37040331 Glycine max
Glyma.19G115100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37038332-37040331 Glycine max
Glyma.19G115100 5.0kb upstream 5.0kb upstream 25581 true Chr19: 37012751-37038331 Glycine max
Glyma.19G115100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37012751-37017750 Glycine max
Glyma.19G115100 5.0kb downstream 5.0kb downstream 25581 true Chr19: 37017751-37043331 Glycine max
Glyma.19G115100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37038332-37043331 Glycine max
Glyma.19G115100 10.0kb upstream 10.0kb upstream 30581 true Chr19: 37007751-37038331 Glycine max
Glyma.19G115100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37007751-37017750 Glycine max
Glyma.19G115100 10.0kb downstream 10.0kb downstream 30581 true Chr19: 37017751-37048331 Glycine max
Glyma.19G115100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37038332-37048331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780131 5273 Angiosperm View MSA
122296824 5265 Fabidae View MSA
124039015 5270 Rosid View MSA
123745214 5271 Pentapetalae View MSA
122771410 5272 Eudicot View MSA
121051758 5274 Embryophyte View MSA
123091833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.25989 0.0 11.2723   Low
cufflinks 5.57658 0.0 17.3928    
cufflinks 3.92558 0.0 12.9644    
cufflinks 5.28498 0.0 16.5353    
cufflinks 4.08755 0.0 13.4063    
cufflinks 3.64596 0.0 12.2583    
cufflinks 8.15231 0.0 24.466   High
cufflinks 4.75085 0.0 15.1315    
cufflinks 4.40366 0.0 14.2433    
cufflinks 0.606        
cufflinks 0.121       Low
cufflinks 0.662        
cufflinks 0.67        
cufflinks 0.751        
cufflinks 0.264        
cufflinks 0.668        
cufflinks 0.394        
cufflinks 0.834        
cufflinks 0.992       High
cufflinks 0.678        
cufflinks 0.192       Low
cufflinks 0.799        
cufflinks 0.684        
cufflinks 0.195       Low
cufflinks 0.683        
cufflinks 0.274        

0 Strain