Gene : Glyma.03G209500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15657:SF1 - THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26 Genomic Order:  2095
Name:  ? Glyma.03G209500 Secondary Identifier:  ? PAC:30518610
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G209500 0.5kb upstream 0.5kb upstream 3168 true Chr03: 41634021-41637188 Glycine max
Glyma.03G209500 0.5kb upstream 0.5kb upstream 500 false Chr03: 41636689-41637188 Glycine max
Glyma.03G209500 0.5kb downstream 0.5kb downstream 3168 true Chr03: 41633521-41636688 Glycine max
Glyma.03G209500 0.5kb downstream 0.5kb downstream 500 false Chr03: 41633521-41634020 Glycine max
Glyma.03G209500 1.0kb upstream 1.0kb upstream 3668 true Chr03: 41634021-41637688 Glycine max
Glyma.03G209500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41636689-41637688 Glycine max
Glyma.03G209500 1.0kb downstream 1.0kb downstream 3668 true Chr03: 41633021-41636688 Glycine max
Glyma.03G209500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41633021-41634020 Glycine max
Glyma.03G209500 2.0kb upstream 2.0kb upstream 4668 true Chr03: 41634021-41638688 Glycine max
Glyma.03G209500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41636689-41638688 Glycine max
Glyma.03G209500 2.0kb downstream 2.0kb downstream 4668 true Chr03: 41632021-41636688 Glycine max
Glyma.03G209500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41632021-41634020 Glycine max
Glyma.03G209500 5.0kb upstream 5.0kb upstream 7668 true Chr03: 41634021-41641688 Glycine max
Glyma.03G209500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41636689-41641688 Glycine max
Glyma.03G209500 5.0kb downstream 5.0kb downstream 7668 true Chr03: 41629021-41636688 Glycine max
Glyma.03G209500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41629021-41634020 Glycine max
Glyma.03G209500 10.0kb upstream 10.0kb upstream 12668 true Chr03: 41634021-41646688 Glycine max
Glyma.03G209500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41636689-41646688 Glycine max
Glyma.03G209500 10.0kb downstream 10.0kb downstream 12668 true Chr03: 41624021-41636688 Glycine max
Glyma.03G209500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41624021-41634020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310128 5265 Fabidae View MSA
124065929 5270 Rosid View MSA
123736421 5271 Pentapetalae View MSA
122791858 5272 Eudicot View MSA
122042448 5273 Angiosperm View MSA
121343985 5274 Embryophyte View MSA
123426667 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1669 0.0 33.8295    
cufflinks 9.42058 0.0 26.8908    
cufflinks 6.6729 0.0 19.8141   Low
cufflinks 10.4946 0.0 29.5002    
cufflinks 12.5355 0.0 34.7271    
cufflinks 14.7596 0.0 40.4088   High
cufflinks 9.57874 0.0 27.3409    
cufflinks 8.35454 0.0 24.1634    
cufflinks 10.8202 0.0 30.4327    
cufflinks 3.64       Low
cufflinks 5.622     High  
cufflinks 5.765        
cufflinks 9.773     High High
cufflinks 12.462     High High
cufflinks 5.624     High  
cufflinks 5.478        
cufflinks 3.209       Low
cufflinks 5.196        
cufflinks 4.487        
cufflinks 4.776        
cufflinks 5.61        
cufflinks 4.526        
cufflinks 5.173        
cufflinks 5.423        
cufflinks 5.127        
cufflinks 3.894        

0 Strain