Gene : Glyma.03G218500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12709:SF1 - DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC8 Genomic Order:  2185
Name:  ? Glyma.03G218500 Secondary Identifier:  ? PAC:30517111
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G218500 0.5kb upstream 0.5kb upstream 5779 true Chr03: 42200271-42206049 Glycine max
Glyma.03G218500 0.5kb upstream 0.5kb upstream 500 false Chr03: 42200271-42200770 Glycine max
Glyma.03G218500 0.5kb downstream 0.5kb downstream 5779 true Chr03: 42200771-42206549 Glycine max
Glyma.03G218500 0.5kb downstream 0.5kb downstream 500 false Chr03: 42206050-42206549 Glycine max
Glyma.03G218500 1.0kb upstream 1.0kb upstream 6279 true Chr03: 42199771-42206049 Glycine max
Glyma.03G218500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42199771-42200770 Glycine max
Glyma.03G218500 1.0kb downstream 1.0kb downstream 6279 true Chr03: 42200771-42207049 Glycine max
Glyma.03G218500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42206050-42207049 Glycine max
Glyma.03G218500 2.0kb upstream 2.0kb upstream 7279 true Chr03: 42198771-42206049 Glycine max
Glyma.03G218500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42198771-42200770 Glycine max
Glyma.03G218500 2.0kb downstream 2.0kb downstream 7279 true Chr03: 42200771-42208049 Glycine max
Glyma.03G218500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42206050-42208049 Glycine max
Glyma.03G218500 5.0kb upstream 5.0kb upstream 10279 true Chr03: 42195771-42206049 Glycine max
Glyma.03G218500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42195771-42200770 Glycine max
Glyma.03G218500 5.0kb downstream 5.0kb downstream 10279 true Chr03: 42200771-42211049 Glycine max
Glyma.03G218500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42206050-42211049 Glycine max
Glyma.03G218500 10.0kb upstream 10.0kb upstream 15279 true Chr03: 42190771-42206049 Glycine max
Glyma.03G218500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42190771-42200770 Glycine max
Glyma.03G218500 10.0kb downstream 10.0kb downstream 15279 true Chr03: 42200771-42216049 Glycine max
Glyma.03G218500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42206050-42216049 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026323 5273 Angiosperm View MSA
122300977 5265 Fabidae View MSA
124064217 5270 Rosid View MSA
123737129 5271 Pentapetalae View MSA
122791861 5272 Eudicot View MSA
121347367 5274 Embryophyte View MSA
123423953 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.5431 0.0 27.9251    
cufflinks 6.68347 0.0 25.4636    
cufflinks 7.82432 0.0 30.5036    
cufflinks 5.37233 0.0 21.9106   Low
cufflinks 9.72909 0.0 35.895    
cufflinks 7.46727 0.0 27.762    
cufflinks 10.8335 0.0 36.2061   High
cufflinks 5.75193 0.0 23.1648   Low
cufflinks 11.8754 0.0 41.6475   High
cufflinks 0.436       Low
cufflinks 1.435       High
cufflinks 0.889        
cufflinks 1.023        
cufflinks 1.248       High
cufflinks 1.29       High
cufflinks 0.805        
cufflinks 0.955        
cufflinks 0.98        
cufflinks 0.837        
cufflinks 0.837        
cufflinks 1.188        
cufflinks 0.776        
cufflinks 0.89        
cufflinks 1.218        
cufflinks 0.817        
cufflinks 0.991        

0 Strain