Gene : Glyma.03G217900 G. max Wm82.a2.v1
Defline:  (1 of 91) PF13912 - C2H2-type zinc finger (zf-C2H2_6) Genomic Order:  2179
Name:  ? Glyma.03G217900 Secondary Identifier:  ? PAC:30519136
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G217900 0.5kb upstream 0.5kb upstream 1133 true Chr03: 42170356-42171488 Glycine max
Glyma.03G217900 0.5kb upstream 0.5kb upstream 500 false Chr03: 42170356-42170855 Glycine max
Glyma.03G217900 0.5kb downstream 0.5kb downstream 1133 true Chr03: 42170856-42171988 Glycine max
Glyma.03G217900 0.5kb downstream 0.5kb downstream 500 false Chr03: 42171489-42171988 Glycine max
Glyma.03G217900 1.0kb upstream 1.0kb upstream 1633 true Chr03: 42169856-42171488 Glycine max
Glyma.03G217900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42169856-42170855 Glycine max
Glyma.03G217900 1.0kb downstream 1.0kb downstream 1633 true Chr03: 42170856-42172488 Glycine max
Glyma.03G217900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42171489-42172488 Glycine max
Glyma.03G217900 2.0kb upstream 2.0kb upstream 2633 true Chr03: 42168856-42171488 Glycine max
Glyma.03G217900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42168856-42170855 Glycine max
Glyma.03G217900 2.0kb downstream 2.0kb downstream 2633 true Chr03: 42170856-42173488 Glycine max
Glyma.03G217900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42171489-42173488 Glycine max
Glyma.03G217900 5.0kb upstream 5.0kb upstream 5633 true Chr03: 42165856-42171488 Glycine max
Glyma.03G217900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42165856-42170855 Glycine max
Glyma.03G217900 5.0kb downstream 5.0kb downstream 5633 true Chr03: 42170856-42176488 Glycine max
Glyma.03G217900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42171489-42176488 Glycine max
Glyma.03G217900 10.0kb upstream 10.0kb upstream 10633 true Chr03: 42160856-42171488 Glycine max
Glyma.03G217900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42160856-42170855 Glycine max
Glyma.03G217900 10.0kb downstream 10.0kb downstream 10633 true Chr03: 42170856-42181488 Glycine max
Glyma.03G217900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42171489-42181488 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255062 5265 Fabidae View MSA
124073459 5270 Rosid View MSA
123747893 5271 Pentapetalae View MSA
122797478 5272 Eudicot View MSA
122051006 5273 Angiosperm View MSA
121350581 5274 Embryophyte View MSA
123381808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0536381 0.0 0.24325 Low  
cufflinks 3.33693 0.0 12.0478   High
cufflinks 0.534129 0.0 2.1007    
cufflinks 0.0901142 0.0 0.389106 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0531464 0.0 0.240538 Low  
cufflinks 0.0536606 0.0 0.242706 Low  
cufflinks 0.637        
cufflinks 0.055        
cufflinks 3.755       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.105        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.251        
cufflinks 0.156        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain