Gene : Glyma.03G218700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30620:SF4 - BETA-D-XYLOSIDASE 2-RELATED Genomic Order:  2187
Name:  ? Glyma.03G218700 Secondary Identifier:  ? PAC:30515350
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G218700 0.5kb upstream 0.5kb upstream 8694 true Chr03: 42230747-42239440 Glycine max
Glyma.03G218700 0.5kb upstream 0.5kb upstream 500 false Chr03: 42238941-42239440 Glycine max
Glyma.03G218700 0.5kb downstream 0.5kb downstream 8694 true Chr03: 42230247-42238940 Glycine max
Glyma.03G218700 0.5kb downstream 0.5kb downstream 500 false Chr03: 42230247-42230746 Glycine max
Glyma.03G218700 1.0kb upstream 1.0kb upstream 9194 true Chr03: 42230747-42239940 Glycine max
Glyma.03G218700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42238941-42239940 Glycine max
Glyma.03G218700 1.0kb downstream 1.0kb downstream 9194 true Chr03: 42229747-42238940 Glycine max
Glyma.03G218700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42229747-42230746 Glycine max
Glyma.03G218700 2.0kb upstream 2.0kb upstream 10194 true Chr03: 42230747-42240940 Glycine max
Glyma.03G218700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42238941-42240940 Glycine max
Glyma.03G218700 2.0kb downstream 2.0kb downstream 10194 true Chr03: 42228747-42238940 Glycine max
Glyma.03G218700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42228747-42230746 Glycine max
Glyma.03G218700 5.0kb upstream 5.0kb upstream 13194 true Chr03: 42230747-42243940 Glycine max
Glyma.03G218700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42238941-42243940 Glycine max
Glyma.03G218700 5.0kb downstream 5.0kb downstream 13194 true Chr03: 42225747-42238940 Glycine max
Glyma.03G218700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42225747-42230746 Glycine max
Glyma.03G218700 10.0kb upstream 10.0kb upstream 18194 true Chr03: 42230747-42248940 Glycine max
Glyma.03G218700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42238941-42248940 Glycine max
Glyma.03G218700 10.0kb downstream 10.0kb downstream 18194 true Chr03: 42220747-42238940 Glycine max
Glyma.03G218700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42220747-42230746 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299683 5265 Fabidae View MSA
124068903 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.641479 0.0 2.23783   Low
cufflinks 4.6533 0.0 12.7892    
cufflinks 1.76621 0.0 5.43226    
cufflinks 15.5752 0.0 42.0085   High
cufflinks 2.47413 0.0 7.24136    
cufflinks 1.46681 0.0 4.62562    
cufflinks 31.0107 0.0 89.1654 High High
cufflinks 9.24381 0.0 24.6667    
cufflinks 6.78779 0.0 18.2328    
cufflinks 2.209        
cufflinks 0.844        
cufflinks 1.178        
cufflinks 2.672       High
cufflinks 1.536        
cufflinks 0.366       Low
cufflinks 2.354        
cufflinks 0.914        
cufflinks 1.118        
cufflinks 2.655       High
cufflinks 1.971        
cufflinks 1.201        
cufflinks 2.108        
cufflinks 1.812        
cufflinks 1.399        
cufflinks 1.769        
cufflinks 0.693       Low

0 Strain