Gene : Glyma.03G216400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21262:SF13 - RELA-SPOT LIKE PROTEIN RSH1 Genomic Order:  2164
Name:  ? Glyma.03G216400 Secondary Identifier:  ? PAC:30515447
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G216400 0.5kb upstream 0.5kb upstream 8595 true Chr03: 42054009-42062603 Glycine max
Glyma.03G216400 0.5kb upstream 0.5kb upstream 500 false Chr03: 42054009-42054508 Glycine max
Glyma.03G216400 0.5kb downstream 0.5kb downstream 8595 true Chr03: 42054509-42063103 Glycine max
Glyma.03G216400 0.5kb downstream 0.5kb downstream 500 false Chr03: 42062604-42063103 Glycine max
Glyma.03G216400 1.0kb upstream 1.0kb upstream 9095 true Chr03: 42053509-42062603 Glycine max
Glyma.03G216400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42053509-42054508 Glycine max
Glyma.03G216400 1.0kb downstream 1.0kb downstream 9095 true Chr03: 42054509-42063603 Glycine max
Glyma.03G216400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42062604-42063603 Glycine max
Glyma.03G216400 2.0kb upstream 2.0kb upstream 10095 true Chr03: 42052509-42062603 Glycine max
Glyma.03G216400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42052509-42054508 Glycine max
Glyma.03G216400 2.0kb downstream 2.0kb downstream 10095 true Chr03: 42054509-42064603 Glycine max
Glyma.03G216400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42062604-42064603 Glycine max
Glyma.03G216400 5.0kb upstream 5.0kb upstream 13095 true Chr03: 42049509-42062603 Glycine max
Glyma.03G216400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42049509-42054508 Glycine max
Glyma.03G216400 5.0kb downstream 5.0kb downstream 13095 true Chr03: 42054509-42067603 Glycine max
Glyma.03G216400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42062604-42067603 Glycine max
Glyma.03G216400 10.0kb upstream 10.0kb upstream 18095 true Chr03: 42044509-42062603 Glycine max
Glyma.03G216400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42044509-42054508 Glycine max
Glyma.03G216400 10.0kb downstream 10.0kb downstream 18095 true Chr03: 42054509-42072603 Glycine max
Glyma.03G216400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42062604-42072603 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306868 5265 Fabidae View MSA
124066114 5270 Rosid View MSA
123750917 5271 Pentapetalae View MSA
122796089 5272 Eudicot View MSA
122044227 5273 Angiosperm View MSA
121348922 5274 Embryophyte View MSA
123424861 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1076 0.0 46.6872   High
cufflinks 7.82948 0.0 20.906    
cufflinks 10.8498 0.0 29.0261    
cufflinks 9.24912 0.0 24.6775    
cufflinks 1.92498 0.0 5.77152   Low
cufflinks 1.03887 0.0 3.39306   Low
cufflinks 6.66921 0.0 17.8765    
cufflinks 7.83775 0.0 20.9272    
cufflinks 2.32848 0.0 6.79766    
cufflinks 3.284        
cufflinks 0.576       Low
cufflinks 4.645        
cufflinks 0.547       Low
cufflinks 0.53       Low
cufflinks 1.125        
cufflinks 7.702     High  
cufflinks 0.849        
cufflinks 4.611        
cufflinks 3.771        
cufflinks 11.872     High High
cufflinks 1.104        
cufflinks 11.042     High High
cufflinks 9.106     High High
cufflinks 0.744        
cufflinks 9.482     High High
cufflinks 0.737        

0 Strain