Gene : Glyma.03G214900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14150 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 Genomic Order:  2149
Name:  ? Glyma.03G214900 Secondary Identifier:  ? PAC:30517945
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G214900 0.5kb upstream 0.5kb upstream 6523 true Chr03: 41959389-41965911 Glycine max
Glyma.03G214900 0.5kb upstream 0.5kb upstream 500 false Chr03: 41965412-41965911 Glycine max
Glyma.03G214900 0.5kb downstream 0.5kb downstream 6523 true Chr03: 41958889-41965411 Glycine max
Glyma.03G214900 0.5kb downstream 0.5kb downstream 500 false Chr03: 41958889-41959388 Glycine max
Glyma.03G214900 1.0kb upstream 1.0kb upstream 7023 true Chr03: 41959389-41966411 Glycine max
Glyma.03G214900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41965412-41966411 Glycine max
Glyma.03G214900 1.0kb downstream 1.0kb downstream 7023 true Chr03: 41958389-41965411 Glycine max
Glyma.03G214900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41958389-41959388 Glycine max
Glyma.03G214900 2.0kb upstream 2.0kb upstream 8023 true Chr03: 41959389-41967411 Glycine max
Glyma.03G214900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41965412-41967411 Glycine max
Glyma.03G214900 2.0kb downstream 2.0kb downstream 8023 true Chr03: 41957389-41965411 Glycine max
Glyma.03G214900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41957389-41959388 Glycine max
Glyma.03G214900 5.0kb upstream 5.0kb upstream 11023 true Chr03: 41959389-41970411 Glycine max
Glyma.03G214900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41965412-41970411 Glycine max
Glyma.03G214900 5.0kb downstream 5.0kb downstream 11023 true Chr03: 41954389-41965411 Glycine max
Glyma.03G214900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41954389-41959388 Glycine max
Glyma.03G214900 10.0kb upstream 10.0kb upstream 16023 true Chr03: 41959389-41975411 Glycine max
Glyma.03G214900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41965412-41975411 Glycine max
Glyma.03G214900 10.0kb downstream 10.0kb downstream 16023 true Chr03: 41949389-41965411 Glycine max
Glyma.03G214900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41949389-41959388 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301492 5265 Fabidae View MSA
124066027 5270 Rosid View MSA
123741569 5271 Pentapetalae View MSA
122789382 5272 Eudicot View MSA
122043501 5273 Angiosperm View MSA
121349819 5274 Embryophyte View MSA
123425174 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.81807 0.0 25.0961   High
cufflinks 3.5595 0.0 14.8139    
cufflinks 2.2598 0.0 9.33177   Low
cufflinks 2.41959 0.0 11.1047   Low
cufflinks 5.70528 0.0 22.2778   High
cufflinks 3.33069 0.0 12.4289    
cufflinks 2.78028 0.0 9.34762    
cufflinks 3.48501 0.0 15.1846    
cufflinks 3.80052 0.0 15.6215    
cufflinks 0.676        
cufflinks 0.115       Low
cufflinks 0.889        
cufflinks 2.014       High
cufflinks 2.728       High
cufflinks 0.343        
cufflinks 0.476        
cufflinks 0.31        
cufflinks 0.878        
cufflinks 1.102        
cufflinks 0.274        
cufflinks 0.234        
cufflinks 0.452        
cufflinks 0.853        
cufflinks 0.162       Low
cufflinks 0.39        
cufflinks 0.446        

0 Strain