Gene : Glyma.19G116100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31587:SF3 - F1K23.6 Genomic Order:  1161
Name:  ? Glyma.19G116100 Secondary Identifier:  ? PAC:30513349
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G116100 0.5kb upstream 0.5kb upstream 6100 true Chr19: 37152124-37158223 Glycine max
Glyma.19G116100 0.5kb upstream 0.5kb upstream 500 false Chr19: 37152124-37152623 Glycine max
Glyma.19G116100 0.5kb downstream 0.5kb downstream 6100 true Chr19: 37152624-37158723 Glycine max
Glyma.19G116100 0.5kb downstream 0.5kb downstream 500 false Chr19: 37158224-37158723 Glycine max
Glyma.19G116100 1.0kb upstream 1.0kb upstream 6600 true Chr19: 37151624-37158223 Glycine max
Glyma.19G116100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37151624-37152623 Glycine max
Glyma.19G116100 1.0kb downstream 1.0kb downstream 6600 true Chr19: 37152624-37159223 Glycine max
Glyma.19G116100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37158224-37159223 Glycine max
Glyma.19G116100 2.0kb upstream 2.0kb upstream 7600 true Chr19: 37150624-37158223 Glycine max
Glyma.19G116100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37150624-37152623 Glycine max
Glyma.19G116100 2.0kb downstream 2.0kb downstream 7600 true Chr19: 37152624-37160223 Glycine max
Glyma.19G116100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37158224-37160223 Glycine max
Glyma.19G116100 5.0kb upstream 5.0kb upstream 10600 true Chr19: 37147624-37158223 Glycine max
Glyma.19G116100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37147624-37152623 Glycine max
Glyma.19G116100 5.0kb downstream 5.0kb downstream 10600 true Chr19: 37152624-37163223 Glycine max
Glyma.19G116100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37158224-37163223 Glycine max
Glyma.19G116100 10.0kb upstream 10.0kb upstream 15600 true Chr19: 37142624-37158223 Glycine max
Glyma.19G116100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37142624-37152623 Glycine max
Glyma.19G116100 10.0kb downstream 10.0kb downstream 15600 true Chr19: 37152624-37168223 Glycine max
Glyma.19G116100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37158224-37168223 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304309 5265 Fabidae View MSA
124062319 5270 Rosid View MSA
123746028 5271 Pentapetalae View MSA
122795784 5272 Eudicot View MSA
122046084 5273 Angiosperm View MSA
121348772 5274 Embryophyte View MSA
123381008 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.00712 0.0 9.11305   Low
cufflinks 5.53717 0.0 15.5446   High
cufflinks 3.72115 0.0 10.9117    
cufflinks 4.50148 0.0 12.9181    
cufflinks 4.80534 0.0 13.6947    
cufflinks 4.23269 0.0 12.2429    
cufflinks 5.69914 0.0 15.9627   High
cufflinks 3.70192 0.0 10.897    
cufflinks 5.03637 0.0 14.2775    
cufflinks 4.172        
cufflinks 5.454       High
cufflinks 2.224        
cufflinks 2.237        
cufflinks 2.608        
cufflinks 4.047        
cufflinks 1.355       Low
cufflinks 6.42     High High
cufflinks 1.997        
cufflinks 2.951        
cufflinks 1.045       Low
cufflinks 3.175        
cufflinks 1.164       Low
cufflinks 2.601        
cufflinks 2.661        
cufflinks 1.125       Low
cufflinks 3.597        

0 Strain