Gene : Glyma.19G116300 G. max Wm82.a2.v1
Defline:  (1 of 19) PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  1163
Name:  ? Glyma.19G116300 Secondary Identifier:  ? PAC:30513371
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G116300 0.5kb upstream 0.5kb upstream 5166 true Chr19: 37167635-37172800 Glycine max
Glyma.19G116300 0.5kb upstream 0.5kb upstream 500 false Chr19: 37167635-37168134 Glycine max
Glyma.19G116300 0.5kb downstream 0.5kb downstream 5166 true Chr19: 37168135-37173300 Glycine max
Glyma.19G116300 0.5kb downstream 0.5kb downstream 500 false Chr19: 37172801-37173300 Glycine max
Glyma.19G116300 1.0kb upstream 1.0kb upstream 5666 true Chr19: 37167135-37172800 Glycine max
Glyma.19G116300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37167135-37168134 Glycine max
Glyma.19G116300 1.0kb downstream 1.0kb downstream 5666 true Chr19: 37168135-37173800 Glycine max
Glyma.19G116300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37172801-37173800 Glycine max
Glyma.19G116300 2.0kb upstream 2.0kb upstream 6666 true Chr19: 37166135-37172800 Glycine max
Glyma.19G116300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37166135-37168134 Glycine max
Glyma.19G116300 2.0kb downstream 2.0kb downstream 6666 true Chr19: 37168135-37174800 Glycine max
Glyma.19G116300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37172801-37174800 Glycine max
Glyma.19G116300 5.0kb upstream 5.0kb upstream 9666 true Chr19: 37163135-37172800 Glycine max
Glyma.19G116300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37163135-37168134 Glycine max
Glyma.19G116300 5.0kb downstream 5.0kb downstream 9666 true Chr19: 37168135-37177800 Glycine max
Glyma.19G116300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37172801-37177800 Glycine max
Glyma.19G116300 10.0kb upstream 10.0kb upstream 14666 true Chr19: 37158135-37172800 Glycine max
Glyma.19G116300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37158135-37168134 Glycine max
Glyma.19G116300 10.0kb downstream 10.0kb downstream 14666 true Chr19: 37168135-37182800 Glycine max
Glyma.19G116300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37172801-37182800 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041251 5273 Angiosperm View MSA
122307316 5265 Fabidae View MSA
124061279 5270 Rosid View MSA
123740523 5271 Pentapetalae View MSA
122790059 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4495 0.0 59.697    
cufflinks 11.5415 0.0 39.6509   Low
cufflinks 31.343 0.0 114.419 High High
cufflinks 13.7847 0.0 47.0489    
cufflinks 11.8406 0.0 40.583   Low
cufflinks 15.9161 0.0 54.3142    
cufflinks 16.9034 0.0 57.8366    
cufflinks 16.5157 0.0 56.4086    
cufflinks 14.6347 0.0 49.8994    
cufflinks 2.429       Low
cufflinks 5.152       High
cufflinks 5.088        
cufflinks 2.245       Low
cufflinks 2.168       Low
cufflinks 3.848        
cufflinks 4.154        
cufflinks 2.823        
cufflinks 3.662        
cufflinks 3.334        
cufflinks 4.598        
cufflinks 5.174       High
cufflinks 4.373        
cufflinks 3.083        
cufflinks 5.959       High
cufflinks 4.278        
cufflinks 4.385        

0 Strain