Gene : Glyma.19G116400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11785:SF411 - CATIONIC AMINO ACID TRANSPORTER 2, VACUOLAR-RELATED Genomic Order:  1164
Name:  ? Glyma.19G116400 Secondary Identifier:  ? PAC:30513339
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G116400 0.5kb upstream 0.5kb upstream 8126 true Chr19: 37177801-37185926 Glycine max
Glyma.19G116400 0.5kb upstream 0.5kb upstream 500 false Chr19: 37177801-37178300 Glycine max
Glyma.19G116400 0.5kb downstream 0.5kb downstream 8126 true Chr19: 37178301-37186426 Glycine max
Glyma.19G116400 0.5kb downstream 0.5kb downstream 500 false Chr19: 37185927-37186426 Glycine max
Glyma.19G116400 1.0kb upstream 1.0kb upstream 8626 true Chr19: 37177301-37185926 Glycine max
Glyma.19G116400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37177301-37178300 Glycine max
Glyma.19G116400 1.0kb downstream 1.0kb downstream 8626 true Chr19: 37178301-37186926 Glycine max
Glyma.19G116400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37185927-37186926 Glycine max
Glyma.19G116400 2.0kb upstream 2.0kb upstream 9626 true Chr19: 37176301-37185926 Glycine max
Glyma.19G116400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37176301-37178300 Glycine max
Glyma.19G116400 2.0kb downstream 2.0kb downstream 9626 true Chr19: 37178301-37187926 Glycine max
Glyma.19G116400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37185927-37187926 Glycine max
Glyma.19G116400 5.0kb upstream 5.0kb upstream 12626 true Chr19: 37173301-37185926 Glycine max
Glyma.19G116400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37173301-37178300 Glycine max
Glyma.19G116400 5.0kb downstream 5.0kb downstream 12626 true Chr19: 37178301-37190926 Glycine max
Glyma.19G116400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37185927-37190926 Glycine max
Glyma.19G116400 10.0kb upstream 10.0kb upstream 17626 true Chr19: 37168301-37185926 Glycine max
Glyma.19G116400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37168301-37178300 Glycine max
Glyma.19G116400 10.0kb downstream 10.0kb downstream 17626 true Chr19: 37178301-37195926 Glycine max
Glyma.19G116400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37185927-37195926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304171 5265 Fabidae View MSA
124069554 5270 Rosid View MSA
123740707 5271 Pentapetalae View MSA
122796807 5272 Eudicot View MSA
122048985 5273 Angiosperm View MSA
121349992 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.31 0.0 38.1787    
cufflinks 5.95315 0.0 16.5508    
cufflinks 44.6235 0.0 127.972 High High
cufflinks 7.68236 0.0 20.9331    
cufflinks 14.6539 0.0 39.0948    
cufflinks 18.7099 0.0 50.0913    
cufflinks 2.81275 0.0 8.56255   Low
cufflinks 12.8881 0.0 34.4142    
cufflinks 22.7489 0.0 61.3335 High  
cufflinks 1.896       Low
cufflinks 11.533     High High
cufflinks 7.909     High  
cufflinks 2.494        
cufflinks 1.73       Low
cufflinks 17.817     High High
cufflinks 2.858        
cufflinks 5.49        
cufflinks 3.108        
cufflinks 2.719        
cufflinks 4.592        
cufflinks 7.739     High  
cufflinks 3.933        
cufflinks 2.071       Low
cufflinks 10.479     High High
cufflinks 3.748        
cufflinks 7.182     High  

0 Strain