Gene : Glyma.03G219600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR34372:SF2 - CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED Genomic Order:  2196
Name:  ? Glyma.03G219600 Secondary Identifier:  ? PAC:30517539
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G219600 0.5kb upstream 0.5kb upstream 2049 true Chr03: 42304587-42306635 Glycine max
Glyma.03G219600 0.5kb upstream 0.5kb upstream 500 false Chr03: 42306136-42306635 Glycine max
Glyma.03G219600 0.5kb downstream 0.5kb downstream 2049 true Chr03: 42304087-42306135 Glycine max
Glyma.03G219600 0.5kb downstream 0.5kb downstream 500 false Chr03: 42304087-42304586 Glycine max
Glyma.03G219600 1.0kb upstream 1.0kb upstream 2549 true Chr03: 42304587-42307135 Glycine max
Glyma.03G219600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42306136-42307135 Glycine max
Glyma.03G219600 1.0kb downstream 1.0kb downstream 2549 true Chr03: 42303587-42306135 Glycine max
Glyma.03G219600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42303587-42304586 Glycine max
Glyma.03G219600 2.0kb upstream 2.0kb upstream 3549 true Chr03: 42304587-42308135 Glycine max
Glyma.03G219600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42306136-42308135 Glycine max
Glyma.03G219600 2.0kb downstream 2.0kb downstream 3549 true Chr03: 42302587-42306135 Glycine max
Glyma.03G219600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42302587-42304586 Glycine max
Glyma.03G219600 5.0kb upstream 5.0kb upstream 6549 true Chr03: 42304587-42311135 Glycine max
Glyma.03G219600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42306136-42311135 Glycine max
Glyma.03G219600 5.0kb downstream 5.0kb downstream 6549 true Chr03: 42299587-42306135 Glycine max
Glyma.03G219600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42299587-42304586 Glycine max
Glyma.03G219600 10.0kb upstream 10.0kb upstream 11549 true Chr03: 42304587-42316135 Glycine max
Glyma.03G219600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42306136-42316135 Glycine max
Glyma.03G219600 10.0kb downstream 10.0kb downstream 11549 true Chr03: 42294587-42306135 Glycine max
Glyma.03G219600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42294587-42304586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298280 5265 Fabidae View MSA
124062705 5270 Rosid View MSA
123751870 5271 Pentapetalae View MSA
122793093 5272 Eudicot View MSA
122049821 5273 Angiosperm View MSA
121349750 5274 Embryophyte View MSA
123428539 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.397313 0.0 1.55698   Low
cufflinks 0.636172 0.0 2.4456   Low
cufflinks 8.19248 0.0 35.1485   High
cufflinks 3.96089 0.0 21.3955    
cufflinks 6.05845 0.0 29.1235    
cufflinks 4.2407 0.0 23.0332    
cufflinks 1.03683 0.0 6.88854    
cufflinks 4.67891 0.0 24.1331    
cufflinks 2.2229 0.0 13.3236    
cufflinks 1.174       High
cufflinks 0.212        
cufflinks 1.325       High
cufflinks 1.563       High
cufflinks 2.189       High
cufflinks 0.061        
cufflinks 0.103        
cufflinks 0.393        
cufflinks 1.518       High
cufflinks 0.066     Low  
cufflinks 0.028     Low Low
cufflinks 0.18        
cufflinks 0.057     Low  
cufflinks 0.078     Low  
cufflinks 0.117        
cufflinks 0.049     Low Low
cufflinks 0.472        

0 Strain