Gene : Glyma.03G226300 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.4.22.1 - Cathepsin B / Cathepsin B1 Genomic Order:  2263
Name:  ? Glyma.03G226300 Secondary Identifier:  ? PAC:30516794
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G226300 0.5kb upstream 0.5kb upstream 6948 true Chr03: 42850467-42857414 Glycine max
Glyma.03G226300 0.5kb upstream 0.5kb upstream 500 false Chr03: 42856915-42857414 Glycine max
Glyma.03G226300 0.5kb downstream 0.5kb downstream 6948 true Chr03: 42849967-42856914 Glycine max
Glyma.03G226300 0.5kb downstream 0.5kb downstream 500 false Chr03: 42849967-42850466 Glycine max
Glyma.03G226300 1.0kb upstream 1.0kb upstream 7448 true Chr03: 42850467-42857914 Glycine max
Glyma.03G226300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42856915-42857914 Glycine max
Glyma.03G226300 1.0kb downstream 1.0kb downstream 7448 true Chr03: 42849467-42856914 Glycine max
Glyma.03G226300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42849467-42850466 Glycine max
Glyma.03G226300 2.0kb upstream 2.0kb upstream 8448 true Chr03: 42850467-42858914 Glycine max
Glyma.03G226300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42856915-42858914 Glycine max
Glyma.03G226300 2.0kb downstream 2.0kb downstream 8448 true Chr03: 42848467-42856914 Glycine max
Glyma.03G226300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42848467-42850466 Glycine max
Glyma.03G226300 5.0kb upstream 5.0kb upstream 11448 true Chr03: 42850467-42861914 Glycine max
Glyma.03G226300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42856915-42861914 Glycine max
Glyma.03G226300 5.0kb downstream 5.0kb downstream 11448 true Chr03: 42845467-42856914 Glycine max
Glyma.03G226300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42845467-42850466 Glycine max
Glyma.03G226300 10.0kb upstream 10.0kb upstream 16448 true Chr03: 42850467-42866914 Glycine max
Glyma.03G226300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42856915-42866914 Glycine max
Glyma.03G226300 10.0kb downstream 10.0kb downstream 16448 true Chr03: 42840467-42856914 Glycine max
Glyma.03G226300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42840467-42850466 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308797 5265 Fabidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 123.084 0.0 380.914 High  
cufflinks 76.2976 0.0 219.881 High Low
cufflinks 501.456 0.0 2283.62 High High
cufflinks 137.519 0.0 435.0 High  
cufflinks 83.908 0.0 244.476 High  
cufflinks 238.183 0.0 850.397 High  
cufflinks 114.959 0.0 351.088 High  
cufflinks 139.914 0.0 444.544 High  
cufflinks 148.804 0.0 478.28 High  
cufflinks 18.161     High  
cufflinks 15.942     High  
cufflinks 51.151     High High
cufflinks 16.002     High  
cufflinks 10.695     High Low
cufflinks 16.015     High  
cufflinks 12.372     High Low
cufflinks 39.802     High High
cufflinks 24.952     High  
cufflinks 14.313     High  
cufflinks 18.486     High  
cufflinks 19.065     High  
cufflinks 19.157     High  
cufflinks 14.245     High  
cufflinks 20.451     High  
cufflinks 14.528     High  
cufflinks 26.767     High  

0 Strain