Gene : Glyma.19G117400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12385:SF51 - F20H23.27 PROTEIN-RELATED Genomic Order:  1174
Name:  ? Glyma.19G117400 Secondary Identifier:  ? PAC:30511189
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G117400 0.5kb upstream 0.5kb upstream 7882 true Chr19: 37359340-37367221 Glycine max
Glyma.19G117400 0.5kb upstream 0.5kb upstream 500 false Chr19: 37366722-37367221 Glycine max
Glyma.19G117400 0.5kb downstream 0.5kb downstream 7882 true Chr19: 37358840-37366721 Glycine max
Glyma.19G117400 0.5kb downstream 0.5kb downstream 500 false Chr19: 37358840-37359339 Glycine max
Glyma.19G117400 1.0kb upstream 1.0kb upstream 8382 true Chr19: 37359340-37367721 Glycine max
Glyma.19G117400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37366722-37367721 Glycine max
Glyma.19G117400 1.0kb downstream 1.0kb downstream 8382 true Chr19: 37358340-37366721 Glycine max
Glyma.19G117400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37358340-37359339 Glycine max
Glyma.19G117400 2.0kb upstream 2.0kb upstream 9382 true Chr19: 37359340-37368721 Glycine max
Glyma.19G117400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37366722-37368721 Glycine max
Glyma.19G117400 2.0kb downstream 2.0kb downstream 9382 true Chr19: 37357340-37366721 Glycine max
Glyma.19G117400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37357340-37359339 Glycine max
Glyma.19G117400 5.0kb upstream 5.0kb upstream 12382 true Chr19: 37359340-37371721 Glycine max
Glyma.19G117400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37366722-37371721 Glycine max
Glyma.19G117400 5.0kb downstream 5.0kb downstream 12382 true Chr19: 37354340-37366721 Glycine max
Glyma.19G117400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37354340-37359339 Glycine max
Glyma.19G117400 10.0kb upstream 10.0kb upstream 17382 true Chr19: 37359340-37376721 Glycine max
Glyma.19G117400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37366722-37376721 Glycine max
Glyma.19G117400 10.0kb downstream 10.0kb downstream 17382 true Chr19: 37349340-37366721 Glycine max
Glyma.19G117400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37349340-37359339 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306459 5265 Fabidae View MSA
124060474 5270 Rosid View MSA
123745461 5271 Pentapetalae View MSA
122789891 5272 Eudicot View MSA
122050147 5273 Angiosperm View MSA
121349087 5274 Embryophyte View MSA
123381160 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.2571 0.0 11.3356    
cufflinks 1.87828 0.0 9.75113    
cufflinks 2.67227 0.0 11.5833    
cufflinks 3.12086 0.0 12.4258    
cufflinks 2.41764 0.0 11.8635    
cufflinks 9.87336 0.0 37.7998   High
cufflinks 1.21268 0.0 8.03172   Low
cufflinks 1.85827 0.0 9.97318    
cufflinks 1.94751 0.0 9.50762    
cufflinks 0.252        
cufflinks 0.505        
cufflinks 0.269        
cufflinks 0.633        
cufflinks 0.301        
cufflinks 0.095       Low
cufflinks 0.692        
cufflinks 0.25        
cufflinks 0.216        
cufflinks 0.573        
cufflinks 0.678        
cufflinks 0.345        
cufflinks 0.656        
cufflinks 0.282        
cufflinks 0.963       High
cufflinks 0.845       High
cufflinks 0.279        

0 Strain