Gene : Glyma.03G231100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF102 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  2311
Name:  ? Glyma.03G231100 Secondary Identifier:  ? PAC:30515874
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G231100 0.5kb upstream 0.5kb upstream 6948 true Chr03: 43264492-43271439 Glycine max
Glyma.03G231100 0.5kb upstream 0.5kb upstream 500 false Chr03: 43264492-43264991 Glycine max
Glyma.03G231100 0.5kb downstream 0.5kb downstream 6948 true Chr03: 43264992-43271939 Glycine max
Glyma.03G231100 0.5kb downstream 0.5kb downstream 500 false Chr03: 43271440-43271939 Glycine max
Glyma.03G231100 1.0kb upstream 1.0kb upstream 7448 true Chr03: 43263992-43271439 Glycine max
Glyma.03G231100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43263992-43264991 Glycine max
Glyma.03G231100 1.0kb downstream 1.0kb downstream 7448 true Chr03: 43264992-43272439 Glycine max
Glyma.03G231100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43271440-43272439 Glycine max
Glyma.03G231100 2.0kb upstream 2.0kb upstream 8448 true Chr03: 43262992-43271439 Glycine max
Glyma.03G231100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43262992-43264991 Glycine max
Glyma.03G231100 2.0kb downstream 2.0kb downstream 8448 true Chr03: 43264992-43273439 Glycine max
Glyma.03G231100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43271440-43273439 Glycine max
Glyma.03G231100 5.0kb upstream 5.0kb upstream 11448 true Chr03: 43259992-43271439 Glycine max
Glyma.03G231100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43259992-43264991 Glycine max
Glyma.03G231100 5.0kb downstream 5.0kb downstream 11448 true Chr03: 43264992-43276439 Glycine max
Glyma.03G231100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43271440-43276439 Glycine max
Glyma.03G231100 10.0kb upstream 10.0kb upstream 16448 true Chr03: 43254992-43271439 Glycine max
Glyma.03G231100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43254992-43264991 Glycine max
Glyma.03G231100 10.0kb downstream 10.0kb downstream 16448 true Chr03: 43264992-43281439 Glycine max
Glyma.03G231100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43271440-43281439 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253961 5265 Fabidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.282675 0.0 1.88857   Low
cufflinks 2.27702 0.0 12.3651    
cufflinks 5.56778 0.0 22.408    
cufflinks 6.75137 0.0 25.5794    
cufflinks 3.74078 0.0 17.51    
cufflinks 1.57582 0.0 9.88037    
cufflinks 0.621819 0.0 2.99848   Low
cufflinks 36.2844 0.0 123.72 High High
cufflinks 3.76654 0.0 17.6164    
cufflinks 1.955       High
cufflinks 0.037     Low  
cufflinks 0.357       High
cufflinks 0.024     Low Low
cufflinks 0.021     Low Low
cufflinks 0.086        
cufflinks 0.055     Low  
cufflinks 0.437       High
cufflinks 0.301        
cufflinks 0.119        
cufflinks 0.054     Low  
cufflinks 0.122        
cufflinks 0.06     Low  
cufflinks 0.161        
cufflinks 0.055     Low  
cufflinks 0.052     Low  
cufflinks 0.076        

0 Strain