Gene : Glyma.03G228200 G. max Wm82.a2.v1
Defline:  (1 of 1) PF03489//PF05184//PF14543 - Saposin-like type B, region 2 (SapB_2) // Saposin-like type B, region 1 (SapB_1) // Xylanase inhibitor N-terminal (TAXi_N) Genomic Order:  2282
Name:  ? Glyma.03G228200 Secondary Identifier:  ? PAC:30518796
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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G228200 0.5kb upstream 0.5kb upstream 5565 true Chr03: 43028333-43033897 Glycine max
Glyma.03G228200 0.5kb upstream 0.5kb upstream 500 false Chr03: 43033398-43033897 Glycine max
Glyma.03G228200 0.5kb downstream 0.5kb downstream 5565 true Chr03: 43027833-43033397 Glycine max
Glyma.03G228200 0.5kb downstream 0.5kb downstream 500 false Chr03: 43027833-43028332 Glycine max
Glyma.03G228200 1.0kb upstream 1.0kb upstream 6065 true Chr03: 43028333-43034397 Glycine max
Glyma.03G228200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43033398-43034397 Glycine max
Glyma.03G228200 1.0kb downstream 1.0kb downstream 6065 true Chr03: 43027333-43033397 Glycine max
Glyma.03G228200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43027333-43028332 Glycine max
Glyma.03G228200 2.0kb upstream 2.0kb upstream 7065 true Chr03: 43028333-43035397 Glycine max
Glyma.03G228200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43033398-43035397 Glycine max
Glyma.03G228200 2.0kb downstream 2.0kb downstream 7065 true Chr03: 43026333-43033397 Glycine max
Glyma.03G228200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43026333-43028332 Glycine max
Glyma.03G228200 5.0kb upstream 5.0kb upstream 10065 true Chr03: 43028333-43038397 Glycine max
Glyma.03G228200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43033398-43038397 Glycine max
Glyma.03G228200 5.0kb downstream 5.0kb downstream 10065 true Chr03: 43023333-43033397 Glycine max
Glyma.03G228200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43023333-43028332 Glycine max
Glyma.03G228200 10.0kb upstream 10.0kb upstream 15065 true Chr03: 43028333-43043397 Glycine max
Glyma.03G228200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43033398-43043397 Glycine max
Glyma.03G228200 10.0kb downstream 10.0kb downstream 15065 true Chr03: 43018333-43033397 Glycine max
Glyma.03G228200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43018333-43028332 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313872 5265 Fabidae View MSA
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.234 0.0 539.798 High  
cufflinks 106.77 0.0 497.997 High  
cufflinks 219.929 0.0 1614.51 High High
cufflinks 162.333 0.0 952.105 High  
cufflinks 76.0278 0.0 303.946 High Low
cufflinks 152.649 0.0 860.681 High  
cufflinks 178.23 0.0 1080.46 High  
cufflinks 105.377 0.0 490.276 High  
cufflinks 86.1615 0.0 365.904 High Low
cufflinks 28.643     High  
cufflinks 16.444     High  
cufflinks 45.623     High High
cufflinks 25.877     High  
cufflinks 19.205     High  
cufflinks 10.55     High Low
cufflinks 20.607     High  
cufflinks 17.169     High  
cufflinks 51.409     High High
cufflinks 28.771     High  
cufflinks 25.354     High  
cufflinks 18.218     High  
cufflinks 24.234     High  
cufflinks 20.879     High  
cufflinks 21.106     High  
cufflinks 23.604     High  
cufflinks 20.201     High  

0 Strain