Gene : Glyma.03G233400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Genomic Order:  2334
Name:  ? Glyma.03G233400 Secondary Identifier:  ? PAC:30516982
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G233400 0.5kb upstream 0.5kb upstream 9603 true Chr03: 43411530-43421132 Glycine max
Glyma.03G233400 0.5kb upstream 0.5kb upstream 500 false Chr03: 43420633-43421132 Glycine max
Glyma.03G233400 0.5kb downstream 0.5kb downstream 9603 true Chr03: 43411030-43420632 Glycine max
Glyma.03G233400 0.5kb downstream 0.5kb downstream 500 false Chr03: 43411030-43411529 Glycine max
Glyma.03G233400 1.0kb upstream 1.0kb upstream 10103 true Chr03: 43411530-43421632 Glycine max
Glyma.03G233400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43420633-43421632 Glycine max
Glyma.03G233400 1.0kb downstream 1.0kb downstream 10103 true Chr03: 43410530-43420632 Glycine max
Glyma.03G233400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43410530-43411529 Glycine max
Glyma.03G233400 2.0kb upstream 2.0kb upstream 11103 true Chr03: 43411530-43422632 Glycine max
Glyma.03G233400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43420633-43422632 Glycine max
Glyma.03G233400 2.0kb downstream 2.0kb downstream 11103 true Chr03: 43409530-43420632 Glycine max
Glyma.03G233400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43409530-43411529 Glycine max
Glyma.03G233400 5.0kb upstream 5.0kb upstream 14103 true Chr03: 43411530-43425632 Glycine max
Glyma.03G233400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43420633-43425632 Glycine max
Glyma.03G233400 5.0kb downstream 5.0kb downstream 14103 true Chr03: 43406530-43420632 Glycine max
Glyma.03G233400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43406530-43411529 Glycine max
Glyma.03G233400 10.0kb upstream 10.0kb upstream 19103 true Chr03: 43411530-43430632 Glycine max
Glyma.03G233400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43420633-43430632 Glycine max
Glyma.03G233400 10.0kb downstream 10.0kb downstream 19103 true Chr03: 43401530-43420632 Glycine max
Glyma.03G233400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43401530-43411529 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026551 5273 Angiosperm View MSA
122313709 5265 Fabidae View MSA
124065590 5270 Rosid View MSA
123741306 5271 Pentapetalae View MSA
122793057 5272 Eudicot View MSA
121296383 5274 Embryophyte View MSA
123334555 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4707 0.0 64.9249    
cufflinks 8.00689 0.0 27.4841    
cufflinks 19.2496 0.0 73.518   High
cufflinks 18.3047 0.0 68.8177    
cufflinks 8.74836 0.0 30.2803    
cufflinks 3.78183 0.0 11.9434   Low
cufflinks 13.6243 0.0 49.0244    
cufflinks 9.72482 0.0 33.4487    
cufflinks 13.7821 0.0 49.2025    
cufflinks 1.664       Low
cufflinks 5.26       High
cufflinks 5.137       High
cufflinks 1.57       Low
cufflinks 1.109       Low
cufflinks 5.291     High High
cufflinks 2.629        
cufflinks 3.054        
cufflinks 4.771        
cufflinks 2.291        
cufflinks 3.977        
cufflinks 4.608        
cufflinks 2.914        
cufflinks 2.207        
cufflinks 4.394        
cufflinks 2.798        
cufflinks 3.354        

0 Strain