Gene : Glyma.19G118800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16821 - FRATAXIN Genomic Order:  1188
Name:  ? Glyma.19G118800 Secondary Identifier:  ? PAC:30512794
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G118800 0.5kb upstream 0.5kb upstream 4865 true Chr19: 37643375-37648239 Glycine max
Glyma.19G118800 0.5kb upstream 0.5kb upstream 500 false Chr19: 37647740-37648239 Glycine max
Glyma.19G118800 0.5kb downstream 0.5kb downstream 4865 true Chr19: 37642875-37647739 Glycine max
Glyma.19G118800 0.5kb downstream 0.5kb downstream 500 false Chr19: 37642875-37643374 Glycine max
Glyma.19G118800 1.0kb upstream 1.0kb upstream 5365 true Chr19: 37643375-37648739 Glycine max
Glyma.19G118800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37647740-37648739 Glycine max
Glyma.19G118800 1.0kb downstream 1.0kb downstream 5365 true Chr19: 37642375-37647739 Glycine max
Glyma.19G118800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37642375-37643374 Glycine max
Glyma.19G118800 2.0kb upstream 2.0kb upstream 6365 true Chr19: 37643375-37649739 Glycine max
Glyma.19G118800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37647740-37649739 Glycine max
Glyma.19G118800 2.0kb downstream 2.0kb downstream 6365 true Chr19: 37641375-37647739 Glycine max
Glyma.19G118800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37641375-37643374 Glycine max
Glyma.19G118800 5.0kb upstream 5.0kb upstream 9365 true Chr19: 37643375-37652739 Glycine max
Glyma.19G118800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37647740-37652739 Glycine max
Glyma.19G118800 5.0kb downstream 5.0kb downstream 9365 true Chr19: 37638375-37647739 Glycine max
Glyma.19G118800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37638375-37643374 Glycine max
Glyma.19G118800 10.0kb upstream 10.0kb upstream 14365 true Chr19: 37643375-37657739 Glycine max
Glyma.19G118800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37647740-37657739 Glycine max
Glyma.19G118800 10.0kb downstream 10.0kb downstream 14365 true Chr19: 37633375-37647739 Glycine max
Glyma.19G118800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37633375-37643374 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302575 5265 Fabidae View MSA
124065709 5270 Rosid View MSA
123738900 5271 Pentapetalae View MSA
122786568 5272 Eudicot View MSA
122048481 5273 Angiosperm View MSA
121346904 5274 Embryophyte View MSA
123425316 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.17155 0.0 26.1492   High
cufflinks 5.41137 0.0 16.5025   Low
cufflinks 5.34696 0.0 16.3673   Low
cufflinks 7.26118 0.0 21.2764    
cufflinks 7.77981 0.0 22.5978    
cufflinks 4.88616 0.0 15.1301   Low
cufflinks 7.52643 0.0 22.0043    
cufflinks 8.38773 0.0 24.1067    
cufflinks 7.35594 0.0 21.5023    
cufflinks 1.259        
cufflinks 0.444       Low
cufflinks 1.232        
cufflinks 1.777       High
cufflinks 2.014       High
cufflinks 0.769        
cufflinks 0.905        
cufflinks 0.908        
cufflinks 1.44        
cufflinks 1.211        
cufflinks 0.958        
cufflinks 0.591       Low
cufflinks 1.071        
cufflinks 1.154        
cufflinks 0.616       Low
cufflinks 1.005        
cufflinks 0.703        

0 Strain