Gene : Glyma.03G233000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13058 - THREE PRIME REPAIR EXONUCLEASE 1, 2 Genomic Order:  2330
Name:  ? Glyma.03G233000 Secondary Identifier:  ? PAC:30518298
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G233000 0.5kb upstream 0.5kb upstream 5026 true Chr03: 43383440-43388465 Glycine max
Glyma.03G233000 0.5kb upstream 0.5kb upstream 500 false Chr03: 43383440-43383939 Glycine max
Glyma.03G233000 0.5kb downstream 0.5kb downstream 5026 true Chr03: 43383940-43388965 Glycine max
Glyma.03G233000 0.5kb downstream 0.5kb downstream 500 false Chr03: 43388466-43388965 Glycine max
Glyma.03G233000 1.0kb upstream 1.0kb upstream 5526 true Chr03: 43382940-43388465 Glycine max
Glyma.03G233000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43382940-43383939 Glycine max
Glyma.03G233000 1.0kb downstream 1.0kb downstream 5526 true Chr03: 43383940-43389465 Glycine max
Glyma.03G233000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43388466-43389465 Glycine max
Glyma.03G233000 2.0kb upstream 2.0kb upstream 6526 true Chr03: 43381940-43388465 Glycine max
Glyma.03G233000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43381940-43383939 Glycine max
Glyma.03G233000 2.0kb downstream 2.0kb downstream 6526 true Chr03: 43383940-43390465 Glycine max
Glyma.03G233000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43388466-43390465 Glycine max
Glyma.03G233000 5.0kb upstream 5.0kb upstream 9526 true Chr03: 43378940-43388465 Glycine max
Glyma.03G233000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43378940-43383939 Glycine max
Glyma.03G233000 5.0kb downstream 5.0kb downstream 9526 true Chr03: 43383940-43393465 Glycine max
Glyma.03G233000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43388466-43393465 Glycine max
Glyma.03G233000 10.0kb upstream 10.0kb upstream 14526 true Chr03: 43373940-43388465 Glycine max
Glyma.03G233000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43373940-43383939 Glycine max
Glyma.03G233000 10.0kb downstream 10.0kb downstream 14526 true Chr03: 43383940-43398465 Glycine max
Glyma.03G233000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43388466-43398465 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305666 5265 Fabidae View MSA
124060599 5270 Rosid View MSA
123737222 5271 Pentapetalae View MSA
122794148 5272 Eudicot View MSA
122047735 5273 Angiosperm View MSA
121310783 5274 Embryophyte View MSA
123348185 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.60332 0.0 16.1767    
cufflinks 3.04811 0.0 10.6751    
cufflinks 115.327 0.0 474.903 High High
cufflinks 5.58644 0.0 25.7577    
cufflinks 3.0184 0.0 10.6658    
cufflinks 5.61325 0.0 21.1165    
cufflinks 3.59085 0.0 16.2839    
cufflinks 3.11528 0.0 10.8202    
cufflinks 2.66375 0.0 12.8975    
cufflinks 0.559        
cufflinks 0.402        
cufflinks 13.607     High High
cufflinks 0.896        
cufflinks 1.178        
cufflinks 0.232       Low
cufflinks 0.513        
cufflinks 0.283        
cufflinks 8.251     High High
cufflinks 0.683        
cufflinks 0.544        
cufflinks 0.397        
cufflinks 0.606        
cufflinks 0.667        
cufflinks 0.242        
cufflinks 0.545        
cufflinks 0.506        

0 Strain