Gene : Glyma.19G119200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  1192
Name:  ? Glyma.19G119200 Secondary Identifier:  ? PAC:30514066
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYSTSYN-PWY Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G119200 0.5kb upstream 0.5kb upstream 6122 true Chr19: 37677273-37683394 Glycine max
Glyma.19G119200 0.5kb upstream 0.5kb upstream 500 false Chr19: 37677273-37677772 Glycine max
Glyma.19G119200 0.5kb downstream 0.5kb downstream 6122 true Chr19: 37677773-37683894 Glycine max
Glyma.19G119200 0.5kb downstream 0.5kb downstream 500 false Chr19: 37683395-37683894 Glycine max
Glyma.19G119200 1.0kb upstream 1.0kb upstream 6622 true Chr19: 37676773-37683394 Glycine max
Glyma.19G119200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 37676773-37677772 Glycine max
Glyma.19G119200 1.0kb downstream 1.0kb downstream 6622 true Chr19: 37677773-37684394 Glycine max
Glyma.19G119200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 37683395-37684394 Glycine max
Glyma.19G119200 2.0kb upstream 2.0kb upstream 7622 true Chr19: 37675773-37683394 Glycine max
Glyma.19G119200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 37675773-37677772 Glycine max
Glyma.19G119200 2.0kb downstream 2.0kb downstream 7622 true Chr19: 37677773-37685394 Glycine max
Glyma.19G119200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 37683395-37685394 Glycine max
Glyma.19G119200 5.0kb upstream 5.0kb upstream 10622 true Chr19: 37672773-37683394 Glycine max
Glyma.19G119200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 37672773-37677772 Glycine max
Glyma.19G119200 5.0kb downstream 5.0kb downstream 10622 true Chr19: 37677773-37688394 Glycine max
Glyma.19G119200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 37683395-37688394 Glycine max
Glyma.19G119200 10.0kb upstream 10.0kb upstream 15622 true Chr19: 37667773-37683394 Glycine max
Glyma.19G119200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 37667773-37677772 Glycine max
Glyma.19G119200 10.0kb downstream 10.0kb downstream 15622 true Chr19: 37677773-37693394 Glycine max
Glyma.19G119200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 37683395-37693394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302417 5265 Fabidae View MSA
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36967 0.0 10.4473   High
cufflinks 3.49265 0.0 10.7794   High
cufflinks 0.850792 0.0 3.06145    
cufflinks 0.592755 0.0 2.18151   Low
cufflinks 1.58111 0.0 5.42206    
cufflinks 1.39601 0.0 4.84213    
cufflinks 1.20999 0.0 4.2506    
cufflinks 1.76358 0.0 5.96581    
cufflinks 0.492415 0.0 1.83116   Low
cufflinks 0.5        
cufflinks 0.075       Low
cufflinks 0.289        
cufflinks 0.402        
cufflinks 0.388        
cufflinks 0.067       Low
cufflinks 1.98       High
cufflinks 0.139        
cufflinks 0.339        
cufflinks 1.292       High
cufflinks 0.978        
cufflinks 0.062     Low Low
cufflinks 1.101        
cufflinks 1.825       High
cufflinks 0.062       Low
cufflinks 1.527       High
cufflinks 0.124        

0 Strain