Gene : Glyma.04G063400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13464 - TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP Genomic Order:  634
Name:  ? Glyma.04G063400 Secondary Identifier:  ? PAC:30488571
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G063400 0.5kb upstream 0.5kb upstream 7636 true Chr04: 5258472-5266107 Glycine max
Glyma.04G063400 0.5kb upstream 0.5kb upstream 500 false Chr04: 5258472-5258971 Glycine max
Glyma.04G063400 0.5kb downstream 0.5kb downstream 7636 true Chr04: 5258972-5266607 Glycine max
Glyma.04G063400 0.5kb downstream 0.5kb downstream 500 false Chr04: 5266108-5266607 Glycine max
Glyma.04G063400 1.0kb upstream 1.0kb upstream 8136 true Chr04: 5257972-5266107 Glycine max
Glyma.04G063400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5257972-5258971 Glycine max
Glyma.04G063400 1.0kb downstream 1.0kb downstream 8136 true Chr04: 5258972-5267107 Glycine max
Glyma.04G063400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5266108-5267107 Glycine max
Glyma.04G063400 2.0kb upstream 2.0kb upstream 9136 true Chr04: 5256972-5266107 Glycine max
Glyma.04G063400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5256972-5258971 Glycine max
Glyma.04G063400 2.0kb downstream 2.0kb downstream 9136 true Chr04: 5258972-5268107 Glycine max
Glyma.04G063400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5266108-5268107 Glycine max
Glyma.04G063400 5.0kb upstream 5.0kb upstream 12136 true Chr04: 5253972-5266107 Glycine max
Glyma.04G063400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5253972-5258971 Glycine max
Glyma.04G063400 5.0kb downstream 5.0kb downstream 12136 true Chr04: 5258972-5271107 Glycine max
Glyma.04G063400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5266108-5271107 Glycine max
Glyma.04G063400 10.0kb upstream 10.0kb upstream 17136 true Chr04: 5248972-5266107 Glycine max
Glyma.04G063400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5248972-5258971 Glycine max
Glyma.04G063400 10.0kb downstream 10.0kb downstream 17136 true Chr04: 5258972-5276107 Glycine max
Glyma.04G063400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5266108-5276107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304244 5265 Fabidae View MSA
124067157 5270 Rosid View MSA
123739885 5271 Pentapetalae View MSA
122794219 5272 Eudicot View MSA
122042858 5273 Angiosperm View MSA
123429181 5275 Viridiplantae View MSA
121344834 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.01437 0.0 24.3545   High
cufflinks 8.13109 0.0 22.1117    
cufflinks 8.74839 0.0 23.6603   High
cufflinks 6.70331 0.0 18.4543   Low
cufflinks 7.56494 0.0 20.6428    
cufflinks 7.10964 0.0 19.5061    
cufflinks 7.23746 0.0 19.8225    
cufflinks 8.00349 0.0 21.7768    
cufflinks 6.28294 0.0 17.4091   Low
cufflinks 2.379        
cufflinks 4.229       High
cufflinks 2.343        
cufflinks 2.238       Low
cufflinks 2.143       Low
cufflinks 2.973        
cufflinks 3.175        
cufflinks 2.85        
cufflinks 1.866       Low
cufflinks 2.869        
cufflinks 3.727        
cufflinks 3.901       High
cufflinks 3.476        
cufflinks 2.573        
cufflinks 4.344       High
cufflinks 3.328        
cufflinks 3.482        

0 Strain