Gene : Glyma.04G067900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13301:SF33 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 1 [UDP-FORMING] Genomic Order:  679
Name:  ? Glyma.04G067900 Secondary Identifier:  ? PAC:30488572
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1001 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G067900 0.5kb upstream 0.5kb upstream 6496 true Chr04: 5686681-5693176 Glycine max
Glyma.04G067900 0.5kb upstream 0.5kb upstream 500 false Chr04: 5692677-5693176 Glycine max
Glyma.04G067900 0.5kb downstream 0.5kb downstream 6496 true Chr04: 5686181-5692676 Glycine max
Glyma.04G067900 0.5kb downstream 0.5kb downstream 500 false Chr04: 5686181-5686680 Glycine max
Glyma.04G067900 1.0kb upstream 1.0kb upstream 6996 true Chr04: 5686681-5693676 Glycine max
Glyma.04G067900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5692677-5693676 Glycine max
Glyma.04G067900 1.0kb downstream 1.0kb downstream 6996 true Chr04: 5685681-5692676 Glycine max
Glyma.04G067900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5685681-5686680 Glycine max
Glyma.04G067900 2.0kb upstream 2.0kb upstream 7996 true Chr04: 5686681-5694676 Glycine max
Glyma.04G067900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5692677-5694676 Glycine max
Glyma.04G067900 2.0kb downstream 2.0kb downstream 7996 true Chr04: 5684681-5692676 Glycine max
Glyma.04G067900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5684681-5686680 Glycine max
Glyma.04G067900 5.0kb upstream 5.0kb upstream 10996 true Chr04: 5686681-5697676 Glycine max
Glyma.04G067900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5692677-5697676 Glycine max
Glyma.04G067900 5.0kb downstream 5.0kb downstream 10996 true Chr04: 5681681-5692676 Glycine max
Glyma.04G067900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5681681-5686680 Glycine max
Glyma.04G067900 10.0kb upstream 10.0kb upstream 15996 true Chr04: 5686681-5702676 Glycine max
Glyma.04G067900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5692677-5702676 Glycine max
Glyma.04G067900 10.0kb downstream 10.0kb downstream 15996 true Chr04: 5676681-5692676 Glycine max
Glyma.04G067900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5676681-5686680 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304699 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.7389 0.0 124.98 High  
cufflinks 41.9771 0.0 129.45 High  
cufflinks 28.8419 0.0 84.3187 High Low
cufflinks 82.1474 0.0 292.392 High  
cufflinks 64.5308 0.0 216.459 High  
cufflinks 122.573 0.0 489.047 High High
cufflinks 33.9634 0.0 101.262 High  
cufflinks 72.1925 0.0 249.593 High  
cufflinks 48.9171 0.0 155.402 High  
cufflinks 74.396     High High
cufflinks 9.303     High Low
cufflinks 28.877     High  
cufflinks 74.515     High High
cufflinks 47.874     High  
cufflinks 18.559     High  
cufflinks 46.99     High  
cufflinks 33.363     High  
cufflinks 43.818     High  
cufflinks 44.347     High  
cufflinks 44.008     High  
cufflinks 15.408     High Low
cufflinks 49.054     High  
cufflinks 39.564     High  
cufflinks 9.964     High Low
cufflinks 40.89     High  
cufflinks 32.88     High  

0 Strain