Gene : Glyma.04G077400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11599:SF4 - PROTEASOME SUBUNIT BETA TYPE Genomic Order:  774
Name:  ? Glyma.04G077400 Secondary Identifier:  ? PAC:30487157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G077400 0.5kb upstream 0.5kb upstream 4362 true Chr04: 6499398-6503759 Glycine max
Glyma.04G077400 0.5kb upstream 0.5kb upstream 500 false Chr04: 6499398-6499897 Glycine max
Glyma.04G077400 0.5kb downstream 0.5kb downstream 4362 true Chr04: 6499898-6504259 Glycine max
Glyma.04G077400 0.5kb downstream 0.5kb downstream 500 false Chr04: 6503760-6504259 Glycine max
Glyma.04G077400 1.0kb upstream 1.0kb upstream 4862 true Chr04: 6498898-6503759 Glycine max
Glyma.04G077400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6498898-6499897 Glycine max
Glyma.04G077400 1.0kb downstream 1.0kb downstream 4862 true Chr04: 6499898-6504759 Glycine max
Glyma.04G077400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6503760-6504759 Glycine max
Glyma.04G077400 2.0kb upstream 2.0kb upstream 5862 true Chr04: 6497898-6503759 Glycine max
Glyma.04G077400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6497898-6499897 Glycine max
Glyma.04G077400 2.0kb downstream 2.0kb downstream 5862 true Chr04: 6499898-6505759 Glycine max
Glyma.04G077400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6503760-6505759 Glycine max
Glyma.04G077400 5.0kb upstream 5.0kb upstream 8862 true Chr04: 6494898-6503759 Glycine max
Glyma.04G077400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6494898-6499897 Glycine max
Glyma.04G077400 5.0kb downstream 5.0kb downstream 8862 true Chr04: 6499898-6508759 Glycine max
Glyma.04G077400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6503760-6508759 Glycine max
Glyma.04G077400 10.0kb upstream 10.0kb upstream 13862 true Chr04: 6489898-6503759 Glycine max
Glyma.04G077400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6489898-6499897 Glycine max
Glyma.04G077400 10.0kb downstream 10.0kb downstream 13862 true Chr04: 6499898-6513759 Glycine max
Glyma.04G077400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6503760-6513759 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308498 5265 Fabidae View MSA
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.5735 0.0 102.986 High Low
cufflinks 53.7987 0.0 145.046 High  
cufflinks 33.4069 0.0 89.1277 High Low
cufflinks 46.1629 0.0 123.718 High  
cufflinks 83.008 0.0 231.209 High High
cufflinks 86.6889 0.0 242.585 High High
cufflinks 57.6653 0.0 155.988 High  
cufflinks 64.3812 0.0 175.588 High  
cufflinks 59.8711 0.0 162.484 High  
cufflinks 13.554     High  
cufflinks 6.673     High  
cufflinks 9.357     High  
cufflinks 21.699     High High
cufflinks 27.245     High High
cufflinks 5.895     High Low
cufflinks 9.197     High  
cufflinks 8.873     High  
cufflinks 10.943     High  
cufflinks 11.861     High  
cufflinks 7.374     High  
cufflinks 8.262     High  
cufflinks 8.041     High  
cufflinks 9.506     High  
cufflinks 7.654     High  
cufflinks 7.303     High  
cufflinks 11.022     High  

0 Strain