Gene : Glyma.19G157700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33057:SF21 - OVATE FAMILY PROTEIN 11-RELATED Genomic Order:  1577
Name:  ? Glyma.19G157700 Secondary Identifier:  ? PAC:30512386
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G157700 0.5kb upstream 0.5kb upstream 1804 true Chr19: 41842118-41843921 Glycine max
Glyma.19G157700 0.5kb upstream 0.5kb upstream 500 false Chr19: 41843422-41843921 Glycine max
Glyma.19G157700 0.5kb downstream 0.5kb downstream 1804 true Chr19: 41841618-41843421 Glycine max
Glyma.19G157700 0.5kb downstream 0.5kb downstream 500 false Chr19: 41841618-41842117 Glycine max
Glyma.19G157700 1.0kb upstream 1.0kb upstream 2304 true Chr19: 41842118-41844421 Glycine max
Glyma.19G157700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 41843422-41844421 Glycine max
Glyma.19G157700 1.0kb downstream 1.0kb downstream 2304 true Chr19: 41841118-41843421 Glycine max
Glyma.19G157700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 41841118-41842117 Glycine max
Glyma.19G157700 2.0kb upstream 2.0kb upstream 3304 true Chr19: 41842118-41845421 Glycine max
Glyma.19G157700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 41843422-41845421 Glycine max
Glyma.19G157700 2.0kb downstream 2.0kb downstream 3304 true Chr19: 41840118-41843421 Glycine max
Glyma.19G157700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 41840118-41842117 Glycine max
Glyma.19G157700 5.0kb upstream 5.0kb upstream 6304 true Chr19: 41842118-41848421 Glycine max
Glyma.19G157700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41843422-41848421 Glycine max
Glyma.19G157700 5.0kb downstream 5.0kb downstream 6304 true Chr19: 41837118-41843421 Glycine max
Glyma.19G157700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 41837118-41842117 Glycine max
Glyma.19G157700 10.0kb upstream 10.0kb upstream 11304 true Chr19: 41842118-41853421 Glycine max
Glyma.19G157700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41843422-41853421 Glycine max
Glyma.19G157700 10.0kb downstream 10.0kb downstream 11304 true Chr19: 41832118-41843421 Glycine max
Glyma.19G157700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 41832118-41842117 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296775 5265 Fabidae View MSA
124065353 5270 Rosid View MSA
123736628 5271 Pentapetalae View MSA
122795583 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.502058 0.0 1.91567    
cufflinks 0.18988 0.0 0.755933 Low  
cufflinks 0.796049 0.0 2.97649    
cufflinks 0.01883 0.0 0.0865084 Low Low
cufflinks 0.0868723 0.0 0.35518 Low  
cufflinks 1.68885 0.0 6.02348   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.076     Low  
cufflinks 0.029     Low  
cufflinks 0.27        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.118        
cufflinks 0.113        
cufflinks 0.072        
cufflinks 1.813       High
cufflinks 0.704       High
cufflinks 0.055     Low  
cufflinks 0.013     Low Low
cufflinks 0.035     Low  
cufflinks 0.105        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104        
cufflinks 0.05     Low  

0 Strain