Gene : Glyma.04G080800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13242 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 Genomic Order:  808
Name:  ? Glyma.04G080800 Secondary Identifier:  ? PAC:30487995
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G080800 0.5kb upstream 0.5kb upstream 4684 true Chr04: 6790071-6794754 Glycine max
Glyma.04G080800 0.5kb upstream 0.5kb upstream 500 false Chr04: 6794255-6794754 Glycine max
Glyma.04G080800 0.5kb downstream 0.5kb downstream 4684 true Chr04: 6789571-6794254 Glycine max
Glyma.04G080800 0.5kb downstream 0.5kb downstream 500 false Chr04: 6789571-6790070 Glycine max
Glyma.04G080800 1.0kb upstream 1.0kb upstream 5184 true Chr04: 6790071-6795254 Glycine max
Glyma.04G080800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6794255-6795254 Glycine max
Glyma.04G080800 1.0kb downstream 1.0kb downstream 5184 true Chr04: 6789071-6794254 Glycine max
Glyma.04G080800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6789071-6790070 Glycine max
Glyma.04G080800 2.0kb upstream 2.0kb upstream 6184 true Chr04: 6790071-6796254 Glycine max
Glyma.04G080800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6794255-6796254 Glycine max
Glyma.04G080800 2.0kb downstream 2.0kb downstream 6184 true Chr04: 6788071-6794254 Glycine max
Glyma.04G080800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6788071-6790070 Glycine max
Glyma.04G080800 5.0kb upstream 5.0kb upstream 9184 true Chr04: 6790071-6799254 Glycine max
Glyma.04G080800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6794255-6799254 Glycine max
Glyma.04G080800 5.0kb downstream 5.0kb downstream 9184 true Chr04: 6785071-6794254 Glycine max
Glyma.04G080800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6785071-6790070 Glycine max
Glyma.04G080800 10.0kb upstream 10.0kb upstream 14184 true Chr04: 6790071-6804254 Glycine max
Glyma.04G080800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6794255-6804254 Glycine max
Glyma.04G080800 10.0kb downstream 10.0kb downstream 14184 true Chr04: 6780071-6794254 Glycine max
Glyma.04G080800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6780071-6790070 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299776 5265 Fabidae View MSA
124061096 5270 Rosid View MSA
123737176 5271 Pentapetalae View MSA
122792721 5272 Eudicot View MSA
122045359 5273 Angiosperm View MSA
121350226 5274 Embryophyte View MSA
123425035 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4793 0.0 62.9777 High  
cufflinks 21.8055 0.0 58.3435 High  
cufflinks 11.9614 0.0 32.1239   Low
cufflinks 22.388 0.0 59.9434 High  
cufflinks 41.0435 0.0 114.328 High High
cufflinks 15.5818 0.0 41.5864    
cufflinks 42.1331 0.0 117.51 High High
cufflinks 20.6514 0.0 55.2064    
cufflinks 22.6073 0.0 60.5751 High  
cufflinks 11.41     High  
cufflinks 6.749     High Low
cufflinks 8.427     High  
cufflinks 21.086     High High
cufflinks 31.972     High High
cufflinks 8.607     High  
cufflinks 11.476     High  
cufflinks 8.661     High  
cufflinks 9.186     High  
cufflinks 14.306     High  
cufflinks 10.51     High  
cufflinks 8.706     High  
cufflinks 10.662     High  
cufflinks 13.571     High  
cufflinks 7.526     High  
cufflinks 11.096     High  
cufflinks 9.297     High  

0 Strain