Gene : Glyma.04G081700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  817
Name:  ? Glyma.04G081700 Secondary Identifier:  ? PAC:30489921
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G081700 0.5kb upstream 0.5kb upstream 8438 true Chr04: 6866100-6874537 Glycine max
Glyma.04G081700 0.5kb upstream 0.5kb upstream 500 false Chr04: 6874038-6874537 Glycine max
Glyma.04G081700 0.5kb downstream 0.5kb downstream 8438 true Chr04: 6865600-6874037 Glycine max
Glyma.04G081700 0.5kb downstream 0.5kb downstream 500 false Chr04: 6865600-6866099 Glycine max
Glyma.04G081700 1.0kb upstream 1.0kb upstream 8938 true Chr04: 6866100-6875037 Glycine max
Glyma.04G081700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6874038-6875037 Glycine max
Glyma.04G081700 1.0kb downstream 1.0kb downstream 8938 true Chr04: 6865100-6874037 Glycine max
Glyma.04G081700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6865100-6866099 Glycine max
Glyma.04G081700 2.0kb upstream 2.0kb upstream 9938 true Chr04: 6866100-6876037 Glycine max
Glyma.04G081700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6874038-6876037 Glycine max
Glyma.04G081700 2.0kb downstream 2.0kb downstream 9938 true Chr04: 6864100-6874037 Glycine max
Glyma.04G081700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6864100-6866099 Glycine max
Glyma.04G081700 5.0kb upstream 5.0kb upstream 12938 true Chr04: 6866100-6879037 Glycine max
Glyma.04G081700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6874038-6879037 Glycine max
Glyma.04G081700 5.0kb downstream 5.0kb downstream 12938 true Chr04: 6861100-6874037 Glycine max
Glyma.04G081700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6861100-6866099 Glycine max
Glyma.04G081700 10.0kb upstream 10.0kb upstream 17938 true Chr04: 6866100-6884037 Glycine max
Glyma.04G081700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6874038-6884037 Glycine max
Glyma.04G081700 10.0kb downstream 10.0kb downstream 17938 true Chr04: 6856100-6874037 Glycine max
Glyma.04G081700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6856100-6866099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314609 5265 Fabidae View MSA
124073208 5270 Rosid View MSA
123756225 5271 Pentapetalae View MSA
122777394 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0218867 0.0 0.089162 Low Low
cufflinks 0.605802 0.0 2.08425   High
cufflinks 0.152928 0.0 0.574958 Low  
cufflinks 0.261071 0.0 0.955869    
cufflinks 0.0929041 0.0 0.357363 Low  
cufflinks 0.130906 0.0 0.495761 Low  
cufflinks 0.893493 0.0 2.94311   High
cufflinks 0.229908 0.0 0.848355 Low  
cufflinks 0.141532 0.0 0.534344 Low  
cufflinks 0.123        
cufflinks 0.027     Low Low
cufflinks 0.159        
cufflinks 0.058     Low  
cufflinks 0.116        
cufflinks 0.023     Low Low
cufflinks 0.237        
cufflinks 0.021     Low Low
cufflinks 0.235        
cufflinks 0.416       High
cufflinks 0.166        
cufflinks 0.033     Low Low
cufflinks 0.261       High
cufflinks 0.245        
cufflinks 0.024     Low Low
cufflinks 0.162        
cufflinks 0.047     Low  

0 Strain