Gene : Glyma.04G080200 G. max Wm82.a2.v1
Defline:  (1 of 5) KOG2443 - Uncharacterized conserved protein Genomic Order:  802
Name:  ? Glyma.04G080200 Secondary Identifier:  ? PAC:30489964
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G080200 0.5kb upstream 0.5kb upstream 6521 true Chr04: 6741530-6748050 Glycine max
Glyma.04G080200 0.5kb upstream 0.5kb upstream 500 false Chr04: 6741530-6742029 Glycine max
Glyma.04G080200 0.5kb downstream 0.5kb downstream 6521 true Chr04: 6742030-6748550 Glycine max
Glyma.04G080200 0.5kb downstream 0.5kb downstream 500 false Chr04: 6748051-6748550 Glycine max
Glyma.04G080200 1.0kb upstream 1.0kb upstream 7021 true Chr04: 6741030-6748050 Glycine max
Glyma.04G080200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6741030-6742029 Glycine max
Glyma.04G080200 1.0kb downstream 1.0kb downstream 7021 true Chr04: 6742030-6749050 Glycine max
Glyma.04G080200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6748051-6749050 Glycine max
Glyma.04G080200 2.0kb upstream 2.0kb upstream 8021 true Chr04: 6740030-6748050 Glycine max
Glyma.04G080200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6740030-6742029 Glycine max
Glyma.04G080200 2.0kb downstream 2.0kb downstream 8021 true Chr04: 6742030-6750050 Glycine max
Glyma.04G080200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6748051-6750050 Glycine max
Glyma.04G080200 5.0kb upstream 5.0kb upstream 11021 true Chr04: 6737030-6748050 Glycine max
Glyma.04G080200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6737030-6742029 Glycine max
Glyma.04G080200 5.0kb downstream 5.0kb downstream 11021 true Chr04: 6742030-6753050 Glycine max
Glyma.04G080200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6748051-6753050 Glycine max
Glyma.04G080200 10.0kb upstream 10.0kb upstream 16021 true Chr04: 6732030-6748050 Glycine max
Glyma.04G080200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6732030-6742029 Glycine max
Glyma.04G080200 10.0kb downstream 10.0kb downstream 16021 true Chr04: 6742030-6758050 Glycine max
Glyma.04G080200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6748051-6758050 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305382 5265 Fabidae View MSA
124062254 5270 Rosid View MSA
123736770 5271 Pentapetalae View MSA
122793360 5272 Eudicot View MSA
122042427 5273 Angiosperm View MSA
121351308 5274 Embryophyte View MSA
123428175 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.274 0.0 84.2243 High  
cufflinks 19.784 0.0 68.0232   Low
cufflinks 18.1374 0.0 62.2298   Low
cufflinks 30.0341 0.0 104.903 High  
cufflinks 35.5432 0.0 126.369 High  
cufflinks 47.865 0.0 180.207 High High
cufflinks 37.0983 0.0 133.784 High  
cufflinks 29.1232 0.0 101.237 High  
cufflinks 26.0103 0.0 89.769 High  
cufflinks 4.18       High
cufflinks 1.564       Low
cufflinks 2.253        
cufflinks 5.569       High
cufflinks 6.658       High
cufflinks 1.528       Low
cufflinks 2.203        
cufflinks 1.758        
cufflinks 3.186        
cufflinks 3.327        
cufflinks 1.994        
cufflinks 1.573       Low
cufflinks 2.177        
cufflinks 2.548        
cufflinks 2.001        
cufflinks 1.954        
cufflinks 1.886        

0 Strain