Gene : Glyma.04G080400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13049 - DUF814-RELATED Genomic Order:  804
Name:  ? Glyma.04G080400 Secondary Identifier:  ? PAC:30490846
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G080400 0.5kb upstream 0.5kb upstream 4039 true Chr04: 6761480-6765518 Glycine max
Glyma.04G080400 0.5kb upstream 0.5kb upstream 500 false Chr04: 6761480-6761979 Glycine max
Glyma.04G080400 0.5kb downstream 0.5kb downstream 4039 true Chr04: 6761980-6766018 Glycine max
Glyma.04G080400 0.5kb downstream 0.5kb downstream 500 false Chr04: 6765519-6766018 Glycine max
Glyma.04G080400 1.0kb upstream 1.0kb upstream 4539 true Chr04: 6760980-6765518 Glycine max
Glyma.04G080400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6760980-6761979 Glycine max
Glyma.04G080400 1.0kb downstream 1.0kb downstream 4539 true Chr04: 6761980-6766518 Glycine max
Glyma.04G080400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6765519-6766518 Glycine max
Glyma.04G080400 2.0kb upstream 2.0kb upstream 5539 true Chr04: 6759980-6765518 Glycine max
Glyma.04G080400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6759980-6761979 Glycine max
Glyma.04G080400 2.0kb downstream 2.0kb downstream 5539 true Chr04: 6761980-6767518 Glycine max
Glyma.04G080400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6765519-6767518 Glycine max
Glyma.04G080400 5.0kb upstream 5.0kb upstream 8539 true Chr04: 6756980-6765518 Glycine max
Glyma.04G080400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6756980-6761979 Glycine max
Glyma.04G080400 5.0kb downstream 5.0kb downstream 8539 true Chr04: 6761980-6770518 Glycine max
Glyma.04G080400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6765519-6770518 Glycine max
Glyma.04G080400 10.0kb upstream 10.0kb upstream 13539 true Chr04: 6751980-6765518 Glycine max
Glyma.04G080400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6751980-6761979 Glycine max
Glyma.04G080400 10.0kb downstream 10.0kb downstream 13539 true Chr04: 6761980-6775518 Glycine max
Glyma.04G080400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6765519-6775518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300807 5265 Fabidae View MSA
124067087 5270 Rosid View MSA
123739069 5271 Pentapetalae View MSA
122794656 5272 Eudicot View MSA
122045362 5273 Angiosperm View MSA
121346079 5274 Embryophyte View MSA
123426375 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1424 0.0 85.3337    
cufflinks 16.7969 0.0 64.1003   Low
cufflinks 55.3853 0.0 263.412 High High
cufflinks 26.3894 0.0 103.094 High  
cufflinks 27.7072 0.0 118.855 High  
cufflinks 73.7436 0.0 378.366 High High
cufflinks 21.4448 0.0 73.1468    
cufflinks 24.8598 0.0 105.268 High  
cufflinks 37.3114 0.0 167.072 High  
cufflinks 2.741        
cufflinks 5.715     High High
cufflinks 6.282       High
cufflinks 4.039        
cufflinks 3.298        
cufflinks 2.624        
cufflinks 1.101       Low
cufflinks 9.153     High High
cufflinks 2.871        
cufflinks 1.609        
cufflinks 1.358       Low
cufflinks 4.271        
cufflinks 1.351       Low
cufflinks 1.547        
cufflinks 5.983       High
cufflinks 1.288       Low
cufflinks 5.466        

0 Strain