Gene : Glyma.04G086400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14255:SF4 - ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN Genomic Order:  864
Name:  ? Glyma.04G086400 Secondary Identifier:  ? PAC:30489008
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G086400 0.5kb upstream 0.5kb upstream 6868 true Chr04: 7346750-7353617 Glycine max
Glyma.04G086400 0.5kb upstream 0.5kb upstream 500 false Chr04: 7353118-7353617 Glycine max
Glyma.04G086400 0.5kb downstream 0.5kb downstream 6868 true Chr04: 7346250-7353117 Glycine max
Glyma.04G086400 0.5kb downstream 0.5kb downstream 500 false Chr04: 7346250-7346749 Glycine max
Glyma.04G086400 1.0kb upstream 1.0kb upstream 7368 true Chr04: 7346750-7354117 Glycine max
Glyma.04G086400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7353118-7354117 Glycine max
Glyma.04G086400 1.0kb downstream 1.0kb downstream 7368 true Chr04: 7345750-7353117 Glycine max
Glyma.04G086400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7345750-7346749 Glycine max
Glyma.04G086400 2.0kb upstream 2.0kb upstream 8368 true Chr04: 7346750-7355117 Glycine max
Glyma.04G086400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7353118-7355117 Glycine max
Glyma.04G086400 2.0kb downstream 2.0kb downstream 8368 true Chr04: 7344750-7353117 Glycine max
Glyma.04G086400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7344750-7346749 Glycine max
Glyma.04G086400 5.0kb upstream 5.0kb upstream 11368 true Chr04: 7346750-7358117 Glycine max
Glyma.04G086400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7353118-7358117 Glycine max
Glyma.04G086400 5.0kb downstream 5.0kb downstream 11368 true Chr04: 7341750-7353117 Glycine max
Glyma.04G086400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7341750-7346749 Glycine max
Glyma.04G086400 10.0kb upstream 10.0kb upstream 16368 true Chr04: 7346750-7363117 Glycine max
Glyma.04G086400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7353118-7363117 Glycine max
Glyma.04G086400 10.0kb downstream 10.0kb downstream 16368 true Chr04: 7336750-7353117 Glycine max
Glyma.04G086400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7336750-7346749 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311734 5265 Fabidae View MSA
124067283 5270 Rosid View MSA
123737024 5271 Pentapetalae View MSA
122788451 5272 Eudicot View MSA
122043636 5273 Angiosperm View MSA
121351486 5274 Embryophyte View MSA
123427639 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.3991 0.0 27.8729    
cufflinks 9.8979 0.0 26.5734    
cufflinks 10.4252 0.0 27.9184    
cufflinks 10.4521 0.0 28.0058    
cufflinks 9.13164 0.0 24.5961    
cufflinks 5.04266 0.0 14.1733   Low
cufflinks 10.4071 0.0 27.9097    
cufflinks 10.0221 0.0 26.8923    
cufflinks 9.43384 0.0 25.379    
cufflinks 2.81        
cufflinks 2.29       Low
cufflinks 3.503        
cufflinks 2.283       Low
cufflinks 2.556        
cufflinks 4.665       High
cufflinks 3.1        
cufflinks 2.205       Low
cufflinks 3.344        
cufflinks 3.801        
cufflinks 4.574       High
cufflinks 3.25        
cufflinks 3.681        
cufflinks 1.924       Low
cufflinks 3.158        
cufflinks 3.829        
cufflinks 2.38        

0 Strain