Gene : Glyma.04G084100 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.13.11.70 - All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  841
Name:  ? Glyma.04G084100 Secondary Identifier:  ? PAC:30490895
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7101 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G084100 0.5kb upstream 0.5kb upstream 4869 true Chr04: 7131909-7136777 Glycine max
Glyma.04G084100 0.5kb upstream 0.5kb upstream 500 false Chr04: 7131909-7132408 Glycine max
Glyma.04G084100 0.5kb downstream 0.5kb downstream 4869 true Chr04: 7132409-7137277 Glycine max
Glyma.04G084100 0.5kb downstream 0.5kb downstream 500 false Chr04: 7136778-7137277 Glycine max
Glyma.04G084100 1.0kb upstream 1.0kb upstream 5369 true Chr04: 7131409-7136777 Glycine max
Glyma.04G084100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7131409-7132408 Glycine max
Glyma.04G084100 1.0kb downstream 1.0kb downstream 5369 true Chr04: 7132409-7137777 Glycine max
Glyma.04G084100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7136778-7137777 Glycine max
Glyma.04G084100 2.0kb upstream 2.0kb upstream 6369 true Chr04: 7130409-7136777 Glycine max
Glyma.04G084100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7130409-7132408 Glycine max
Glyma.04G084100 2.0kb downstream 2.0kb downstream 6369 true Chr04: 7132409-7138777 Glycine max
Glyma.04G084100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7136778-7138777 Glycine max
Glyma.04G084100 5.0kb upstream 5.0kb upstream 9369 true Chr04: 7127409-7136777 Glycine max
Glyma.04G084100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7127409-7132408 Glycine max
Glyma.04G084100 5.0kb downstream 5.0kb downstream 9369 true Chr04: 7132409-7141777 Glycine max
Glyma.04G084100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7136778-7141777 Glycine max
Glyma.04G084100 10.0kb upstream 10.0kb upstream 14369 true Chr04: 7122409-7136777 Glycine max
Glyma.04G084100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7122409-7132408 Glycine max
Glyma.04G084100 10.0kb downstream 10.0kb downstream 14369 true Chr04: 7132409-7146777 Glycine max
Glyma.04G084100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7136778-7146777 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305580 5265 Fabidae View MSA
124065320 5270 Rosid View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0370899 0.0 0.151318 Low  
cufflinks 0.00601032 0.0 0.0284363 Low  
cufflinks 0.00513494 0.0 0.024689 Low Low
cufflinks 0.885193 0.0 3.08612    
cufflinks 0.0687349 0.0 0.272982 Low  
cufflinks 0.00806551 0.0 0.0369417 Low  
cufflinks 8.48288 0.0 22.9005   High
cufflinks 2.1389 0.0 6.70224   High
cufflinks 1.642       High
cufflinks 0.035     Low  
cufflinks 0.004     Low Low
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.077        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.634       High
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.183        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09        

0 Strain