Gene : Glyma.19G159200 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  1592
Name:  ? Glyma.19G159200 Secondary Identifier:  ? PAC:30514529
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G159200 0.5kb upstream 0.5kb upstream 4476 true Chr19: 42003941-42008416 Glycine max
Glyma.19G159200 0.5kb upstream 0.5kb upstream 500 false Chr19: 42003941-42004440 Glycine max
Glyma.19G159200 0.5kb downstream 0.5kb downstream 4476 true Chr19: 42004441-42008916 Glycine max
Glyma.19G159200 0.5kb downstream 0.5kb downstream 500 false Chr19: 42008417-42008916 Glycine max
Glyma.19G159200 1.0kb upstream 1.0kb upstream 4976 true Chr19: 42003441-42008416 Glycine max
Glyma.19G159200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42003441-42004440 Glycine max
Glyma.19G159200 1.0kb downstream 1.0kb downstream 4976 true Chr19: 42004441-42009416 Glycine max
Glyma.19G159200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42008417-42009416 Glycine max
Glyma.19G159200 2.0kb upstream 2.0kb upstream 5976 true Chr19: 42002441-42008416 Glycine max
Glyma.19G159200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42002441-42004440 Glycine max
Glyma.19G159200 2.0kb downstream 2.0kb downstream 5976 true Chr19: 42004441-42010416 Glycine max
Glyma.19G159200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42008417-42010416 Glycine max
Glyma.19G159200 5.0kb upstream 5.0kb upstream 8976 true Chr19: 41999441-42008416 Glycine max
Glyma.19G159200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 41999441-42004440 Glycine max
Glyma.19G159200 5.0kb downstream 5.0kb downstream 8976 true Chr19: 42004441-42013416 Glycine max
Glyma.19G159200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42008417-42013416 Glycine max
Glyma.19G159200 10.0kb upstream 10.0kb upstream 13976 true Chr19: 41994441-42008416 Glycine max
Glyma.19G159200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 41994441-42004440 Glycine max
Glyma.19G159200 10.0kb downstream 10.0kb downstream 13976 true Chr19: 42004441-42018416 Glycine max
Glyma.19G159200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42008417-42018416 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307435 5265 Fabidae View MSA
124061946 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.90977 0.0 19.0831   High
cufflinks 1.41131 0.0 4.76099    
cufflinks 0.86831 0.0 3.06896    
cufflinks 0.498704 0.0 1.8291    
cufflinks 0.56895 0.0 2.07139    
cufflinks 0.785637 0.0 2.79962    
cufflinks 0.68323 0.0 2.45637    
cufflinks 0.42693 0.0 1.57904    
cufflinks 0.506        
cufflinks 0.062        
cufflinks 1.572       High
cufflinks 0.335        
cufflinks 0.316        
cufflinks 0.029     Low Low
cufflinks 0.322        
cufflinks 0.041     Low Low
cufflinks 0.824        
cufflinks 3.003       High
cufflinks 0.171        
cufflinks 0.048     Low Low
cufflinks 0.283        
cufflinks 0.726        
cufflinks 0.019     Low Low
cufflinks 0.205        
cufflinks 0.133        

0 Strain