Gene : Glyma.04G089000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11206:SF92 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  890
Name:  ? Glyma.04G089000 Secondary Identifier:  ? PAC:30487873
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G089000 0.5kb upstream 0.5kb upstream 2761 true Chr04: 7717559-7720319 Glycine max
Glyma.04G089000 0.5kb upstream 0.5kb upstream 500 false Chr04: 7717559-7718058 Glycine max
Glyma.04G089000 0.5kb downstream 0.5kb downstream 2761 true Chr04: 7718059-7720819 Glycine max
Glyma.04G089000 0.5kb downstream 0.5kb downstream 500 false Chr04: 7720320-7720819 Glycine max
Glyma.04G089000 1.0kb upstream 1.0kb upstream 3261 true Chr04: 7717059-7720319 Glycine max
Glyma.04G089000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7717059-7718058 Glycine max
Glyma.04G089000 1.0kb downstream 1.0kb downstream 3261 true Chr04: 7718059-7721319 Glycine max
Glyma.04G089000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7720320-7721319 Glycine max
Glyma.04G089000 2.0kb upstream 2.0kb upstream 4261 true Chr04: 7716059-7720319 Glycine max
Glyma.04G089000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7716059-7718058 Glycine max
Glyma.04G089000 2.0kb downstream 2.0kb downstream 4261 true Chr04: 7718059-7722319 Glycine max
Glyma.04G089000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7720320-7722319 Glycine max
Glyma.04G089000 5.0kb upstream 5.0kb upstream 7261 true Chr04: 7713059-7720319 Glycine max
Glyma.04G089000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7713059-7718058 Glycine max
Glyma.04G089000 5.0kb downstream 5.0kb downstream 7261 true Chr04: 7718059-7725319 Glycine max
Glyma.04G089000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7720320-7725319 Glycine max
Glyma.04G089000 10.0kb upstream 10.0kb upstream 12261 true Chr04: 7708059-7720319 Glycine max
Glyma.04G089000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7708059-7718058 Glycine max
Glyma.04G089000 10.0kb downstream 10.0kb downstream 12261 true Chr04: 7718059-7730319 Glycine max
Glyma.04G089000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7720320-7730319 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313961 5265 Fabidae View MSA
124064495 5270 Rosid View MSA
123738593 5271 Pentapetalae View MSA
122792210 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.42924 0.0 4.94593   High
cufflinks 1.274 0.0 4.46755   High
cufflinks 1.01663 0.0 3.63674    
cufflinks 0.385645 0.0 1.45166    
cufflinks 0.0763072 0.0 0.305605 Low  
cufflinks 0.0494594 0.0 0.202216 Low  
cufflinks 0.0115852 0.0 0.0530626 Low Low
cufflinks 0.460565 0.0 1.71807    
cufflinks 0.107009 0.0 0.423925 Low  
cufflinks 0.1        
cufflinks 0.295        
cufflinks 0.054     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.738       High
cufflinks 0.065     Low  
cufflinks 0.609       High
cufflinks 0.069     Low  
cufflinks 0.543       High
cufflinks 0.096        
cufflinks 0.227        
cufflinks 0.038     Low Low
cufflinks 0.072     Low  
cufflinks 0.265        
cufflinks 0.304        
cufflinks 0.277        

0 Strain