Gene : Glyma.04G090100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31945:SF6 - TRANSCRIPTION FACTOR BHLH61-RELATED Genomic Order:  901
Name:  ? Glyma.04G090100 Secondary Identifier:  ? PAC:30488548
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G090100 0.5kb upstream 0.5kb upstream 2526 true Chr04: 7925049-7927574 Glycine max
Glyma.04G090100 0.5kb upstream 0.5kb upstream 500 false Chr04: 7927075-7927574 Glycine max
Glyma.04G090100 0.5kb downstream 0.5kb downstream 2526 true Chr04: 7924549-7927074 Glycine max
Glyma.04G090100 0.5kb downstream 0.5kb downstream 500 false Chr04: 7924549-7925048 Glycine max
Glyma.04G090100 1.0kb upstream 1.0kb upstream 3026 true Chr04: 7925049-7928074 Glycine max
Glyma.04G090100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7927075-7928074 Glycine max
Glyma.04G090100 1.0kb downstream 1.0kb downstream 3026 true Chr04: 7924049-7927074 Glycine max
Glyma.04G090100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7924049-7925048 Glycine max
Glyma.04G090100 2.0kb upstream 2.0kb upstream 4026 true Chr04: 7925049-7929074 Glycine max
Glyma.04G090100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7927075-7929074 Glycine max
Glyma.04G090100 2.0kb downstream 2.0kb downstream 4026 true Chr04: 7923049-7927074 Glycine max
Glyma.04G090100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7923049-7925048 Glycine max
Glyma.04G090100 5.0kb upstream 5.0kb upstream 7026 true Chr04: 7925049-7932074 Glycine max
Glyma.04G090100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7927075-7932074 Glycine max
Glyma.04G090100 5.0kb downstream 5.0kb downstream 7026 true Chr04: 7920049-7927074 Glycine max
Glyma.04G090100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7920049-7925048 Glycine max
Glyma.04G090100 10.0kb upstream 10.0kb upstream 12026 true Chr04: 7925049-7937074 Glycine max
Glyma.04G090100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7927075-7937074 Glycine max
Glyma.04G090100 10.0kb downstream 10.0kb downstream 12026 true Chr04: 7915049-7927074 Glycine max
Glyma.04G090100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7915049-7925048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310483 5265 Fabidae View MSA
124070728 5270 Rosid View MSA
123747636 5271 Pentapetalae View MSA
122790182 5272 Eudicot View MSA
122048874 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.253388 0.0 0.968898    
cufflinks 0.0787048 0.0 0.314434 Low  
cufflinks 0.0208783 0.0 0.0904358 Low Low
cufflinks 2.81518 0.0 8.91839    
cufflinks 0.611849 0.0 2.24482    
cufflinks 0.603539 0.0 2.21716    
cufflinks 0.88582 0.0 3.16965    
cufflinks 10.5682 0.0 28.6994   High
cufflinks 0.109        
cufflinks 0.461        
cufflinks 0.387        
cufflinks 1.591        
cufflinks 7.375     High High
cufflinks 1.416        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.028        
cufflinks 0.957        
cufflinks 0.221        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.683        
cufflinks 0.024     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.075       Low
cufflinks 0.026     Low Low
cufflinks 1.951        

0 Strain