Gene : Glyma.19G148600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13871//PTHR13871:SF36 - THIOREDOXIN Genomic Order:  1486
Name:  ? Glyma.19G148600 Secondary Identifier:  ? PAC:30514996
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G148600 0.5kb upstream 0.5kb upstream 3584 true Chr19: 40896424-40900007 Glycine max
Glyma.19G148600 0.5kb upstream 0.5kb upstream 500 false Chr19: 40896424-40896923 Glycine max
Glyma.19G148600 0.5kb downstream 0.5kb downstream 3584 true Chr19: 40896924-40900507 Glycine max
Glyma.19G148600 0.5kb downstream 0.5kb downstream 500 false Chr19: 40900008-40900507 Glycine max
Glyma.19G148600 1.0kb upstream 1.0kb upstream 4084 true Chr19: 40895924-40900007 Glycine max
Glyma.19G148600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40895924-40896923 Glycine max
Glyma.19G148600 1.0kb downstream 1.0kb downstream 4084 true Chr19: 40896924-40901007 Glycine max
Glyma.19G148600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40900008-40901007 Glycine max
Glyma.19G148600 2.0kb upstream 2.0kb upstream 5084 true Chr19: 40894924-40900007 Glycine max
Glyma.19G148600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40894924-40896923 Glycine max
Glyma.19G148600 2.0kb downstream 2.0kb downstream 5084 true Chr19: 40896924-40902007 Glycine max
Glyma.19G148600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40900008-40902007 Glycine max
Glyma.19G148600 5.0kb upstream 5.0kb upstream 8084 true Chr19: 40891924-40900007 Glycine max
Glyma.19G148600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40891924-40896923 Glycine max
Glyma.19G148600 5.0kb downstream 5.0kb downstream 8084 true Chr19: 40896924-40905007 Glycine max
Glyma.19G148600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40900008-40905007 Glycine max
Glyma.19G148600 10.0kb upstream 10.0kb upstream 13084 true Chr19: 40886924-40900007 Glycine max
Glyma.19G148600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40886924-40896923 Glycine max
Glyma.19G148600 10.0kb downstream 10.0kb downstream 13084 true Chr19: 40896924-40910007 Glycine max
Glyma.19G148600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40900008-40910007 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310292 5265 Fabidae View MSA
124073817 5270 Rosid View MSA
123749081 5271 Pentapetalae View MSA
122772976 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0882389 0.0 0.350189 Low  
cufflinks 0.477999 0.0 1.76622    
cufflinks 1.0056 0.0 3.5473   High
cufflinks 0.488795 0.0 1.80574    
cufflinks 0.209816 0.0 0.805954    
cufflinks 0.011513 0.0 0.0521074 Low Low
cufflinks 0.412599 0.0 1.53646    
cufflinks 0.386        
cufflinks 0.17        
cufflinks 0.169        
cufflinks 0.933       High
cufflinks 0.736       High
cufflinks 0.25        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.196        
cufflinks 0.167        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.092        
cufflinks 0.006     Low Low
cufflinks 0.01     Low Low
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  

0 Strain