Gene : Glyma.04G036000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12383:SF15 - THYLAKOIDAL PROCESSING PEPTIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  360
Name:  ? Glyma.04G036000 Secondary Identifier:  ? PAC:30488624
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G036000 0.5kb upstream 0.5kb upstream 3166 true Chr04: 2847620-2850785 Glycine max
Glyma.04G036000 0.5kb upstream 0.5kb upstream 500 false Chr04: 2847620-2848119 Glycine max
Glyma.04G036000 0.5kb downstream 0.5kb downstream 3166 true Chr04: 2848120-2851285 Glycine max
Glyma.04G036000 0.5kb downstream 0.5kb downstream 500 false Chr04: 2850786-2851285 Glycine max
Glyma.04G036000 1.0kb upstream 1.0kb upstream 3666 true Chr04: 2847120-2850785 Glycine max
Glyma.04G036000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2847120-2848119 Glycine max
Glyma.04G036000 1.0kb downstream 1.0kb downstream 3666 true Chr04: 2848120-2851785 Glycine max
Glyma.04G036000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2850786-2851785 Glycine max
Glyma.04G036000 2.0kb upstream 2.0kb upstream 4666 true Chr04: 2846120-2850785 Glycine max
Glyma.04G036000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2846120-2848119 Glycine max
Glyma.04G036000 2.0kb downstream 2.0kb downstream 4666 true Chr04: 2848120-2852785 Glycine max
Glyma.04G036000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2850786-2852785 Glycine max
Glyma.04G036000 5.0kb upstream 5.0kb upstream 7666 true Chr04: 2843120-2850785 Glycine max
Glyma.04G036000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2843120-2848119 Glycine max
Glyma.04G036000 5.0kb downstream 5.0kb downstream 7666 true Chr04: 2848120-2855785 Glycine max
Glyma.04G036000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2850786-2855785 Glycine max
Glyma.04G036000 10.0kb upstream 10.0kb upstream 12666 true Chr04: 2838120-2850785 Glycine max
Glyma.04G036000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2838120-2848119 Glycine max
Glyma.04G036000 10.0kb downstream 10.0kb downstream 12666 true Chr04: 2848120-2860785 Glycine max
Glyma.04G036000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2850786-2860785 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301508 5265 Fabidae View MSA
124066317 5270 Rosid View MSA
123747244 5271 Pentapetalae View MSA
122789106 5272 Eudicot View MSA
122046589 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348818 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.507 0.0 200.298 High High
cufflinks 11.7302 0.0 48.7376   Low
cufflinks 23.9841 0.0 88.6477 High  
cufflinks 19.7056 0.0 81.7166    
cufflinks 27.5084 0.0 104.244 High  
cufflinks 49.3344 0.0 229.251 High High
cufflinks 9.04289 0.0 36.5924   Low
cufflinks 20.751 0.0 85.2789    
cufflinks 21.0887 0.0 79.8562 High  
cufflinks 3.238        
cufflinks 6.299     High High
cufflinks 2.939        
cufflinks 4.578        
cufflinks 3.452        
cufflinks 2.371       Low
cufflinks 3.095        
cufflinks 7.056     High High
cufflinks 2.644        
cufflinks 2.483       Low
cufflinks 2.886        
cufflinks 4.753        
cufflinks 3.376        
cufflinks 3.511        
cufflinks 7.303     High High
cufflinks 2.94        
cufflinks 6.489     High High

0 Strain