Gene : Glyma.19G149100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Genomic Order:  1491
Name:  ? Glyma.19G149100 Secondary Identifier:  ? PAC:30514812
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G149100 0.5kb upstream 0.5kb upstream 3941 true Chr19: 40945527-40949467 Glycine max
Glyma.19G149100 0.5kb upstream 0.5kb upstream 500 false Chr19: 40948968-40949467 Glycine max
Glyma.19G149100 0.5kb downstream 0.5kb downstream 3941 true Chr19: 40945027-40948967 Glycine max
Glyma.19G149100 0.5kb downstream 0.5kb downstream 500 false Chr19: 40945027-40945526 Glycine max
Glyma.19G149100 1.0kb upstream 1.0kb upstream 4441 true Chr19: 40945527-40949967 Glycine max
Glyma.19G149100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40948968-40949967 Glycine max
Glyma.19G149100 1.0kb downstream 1.0kb downstream 4441 true Chr19: 40944527-40948967 Glycine max
Glyma.19G149100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40944527-40945526 Glycine max
Glyma.19G149100 2.0kb upstream 2.0kb upstream 5441 true Chr19: 40945527-40950967 Glycine max
Glyma.19G149100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40948968-40950967 Glycine max
Glyma.19G149100 2.0kb downstream 2.0kb downstream 5441 true Chr19: 40943527-40948967 Glycine max
Glyma.19G149100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40943527-40945526 Glycine max
Glyma.19G149100 5.0kb upstream 5.0kb upstream 8441 true Chr19: 40945527-40953967 Glycine max
Glyma.19G149100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40948968-40953967 Glycine max
Glyma.19G149100 5.0kb downstream 5.0kb downstream 8441 true Chr19: 40940527-40948967 Glycine max
Glyma.19G149100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40940527-40945526 Glycine max
Glyma.19G149100 10.0kb upstream 10.0kb upstream 13441 true Chr19: 40945527-40958967 Glycine max
Glyma.19G149100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40948968-40958967 Glycine max
Glyma.19G149100 10.0kb downstream 10.0kb downstream 13441 true Chr19: 40935527-40948967 Glycine max
Glyma.19G149100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40935527-40945526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303438 5265 Fabidae View MSA
124071549 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.36282 0.0 17.3537    
cufflinks 8.20333 0.0 22.0652    
cufflinks 9.02209 0.0 24.1735    
cufflinks 26.9787 0.0 74.5165 High High
cufflinks 6.45293 0.0 17.5921    
cufflinks 4.51099 0.0 12.6608    
cufflinks 1.3598 0.0 4.48086   Low
cufflinks 11.0646 0.0 29.5302    
cufflinks 4.50466 0.0 12.6358    
cufflinks 16.963     High High
cufflinks 0.166       Low
cufflinks 12.103     High  
cufflinks 7.878     High  
cufflinks 7.199     High  
cufflinks 0.293       Low
cufflinks 6.976        
cufflinks 3.287        
cufflinks 13.126     High  
cufflinks 7.231        
cufflinks 4.188        
cufflinks 0.29       Low
cufflinks 5.867        
cufflinks 7.763     High  
cufflinks 0.176       Low
cufflinks 4.144        
cufflinks 0.933        

0 Strain