Gene : Glyma.19G149400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10429 - DNA-3-METHYLADENINE GLYCOSYLASE Genomic Order:  1494
Name:  ? Glyma.19G149400 Secondary Identifier:  ? PAC:30512253
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G149400 0.5kb upstream 0.5kb upstream 4088 true Chr19: 40968543-40972630 Glycine max
Glyma.19G149400 0.5kb upstream 0.5kb upstream 500 false Chr19: 40968543-40969042 Glycine max
Glyma.19G149400 0.5kb downstream 0.5kb downstream 4088 true Chr19: 40969043-40973130 Glycine max
Glyma.19G149400 0.5kb downstream 0.5kb downstream 500 false Chr19: 40972631-40973130 Glycine max
Glyma.19G149400 1.0kb upstream 1.0kb upstream 4588 true Chr19: 40968043-40972630 Glycine max
Glyma.19G149400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 40968043-40969042 Glycine max
Glyma.19G149400 1.0kb downstream 1.0kb downstream 4588 true Chr19: 40969043-40973630 Glycine max
Glyma.19G149400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 40972631-40973630 Glycine max
Glyma.19G149400 2.0kb upstream 2.0kb upstream 5588 true Chr19: 40967043-40972630 Glycine max
Glyma.19G149400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 40967043-40969042 Glycine max
Glyma.19G149400 2.0kb downstream 2.0kb downstream 5588 true Chr19: 40969043-40974630 Glycine max
Glyma.19G149400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 40972631-40974630 Glycine max
Glyma.19G149400 5.0kb upstream 5.0kb upstream 8588 true Chr19: 40964043-40972630 Glycine max
Glyma.19G149400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 40964043-40969042 Glycine max
Glyma.19G149400 5.0kb downstream 5.0kb downstream 8588 true Chr19: 40969043-40977630 Glycine max
Glyma.19G149400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 40972631-40977630 Glycine max
Glyma.19G149400 10.0kb upstream 10.0kb upstream 13588 true Chr19: 40959043-40972630 Glycine max
Glyma.19G149400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 40959043-40969042 Glycine max
Glyma.19G149400 10.0kb downstream 10.0kb downstream 13588 true Chr19: 40969043-40982630 Glycine max
Glyma.19G149400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 40972631-40982630 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300809 5265 Fabidae View MSA
124071357 5270 Rosid View MSA
123741300 5271 Pentapetalae View MSA
122788938 5272 Eudicot View MSA
122044995 5273 Angiosperm View MSA
121344812 5274 Embryophyte View MSA
123380104 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71307 0.0 10.2987   Low
cufflinks 5.18335 0.0 22.4017    
cufflinks 5.28905 0.0 22.2468    
cufflinks 7.52901 0.0 32.6309   High
cufflinks 4.4355 0.0 19.2723    
cufflinks 3.57119 0.0 16.6281    
cufflinks 10.4654 0.0 35.1674   High
cufflinks 4.0533 0.0 13.9281    
cufflinks 4.1715 0.0 19.0992    
cufflinks 0.286        
cufflinks 0.422        
cufflinks 0.7       High
cufflinks 0.371        
cufflinks 0.347        
cufflinks 0.293        
cufflinks 0.334        
cufflinks 0.211       Low
cufflinks 0.651       High
cufflinks 0.744       High
cufflinks 0.189       Low
cufflinks 0.335        
cufflinks 0.323        
cufflinks 0.339        
cufflinks 0.619       High
cufflinks 0.323        
cufflinks 0.348        

0 Strain