Gene : Glyma.04G039900 G. max Wm82.a2.v1
Defline:  (1 of 152) PF02458 - Transferase family (Transferase) Genomic Order:  399
Name:  ? Glyma.04G039900 Secondary Identifier:  ? PAC:30491046
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G039900 0.5kb upstream 0.5kb upstream 2072 true Chr04: 3206527-3208598 Glycine max
Glyma.04G039900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3208099-3208598 Glycine max
Glyma.04G039900 0.5kb downstream 0.5kb downstream 2072 true Chr04: 3206027-3208098 Glycine max
Glyma.04G039900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3206027-3206526 Glycine max
Glyma.04G039900 1.0kb upstream 1.0kb upstream 2572 true Chr04: 3206527-3209098 Glycine max
Glyma.04G039900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3208099-3209098 Glycine max
Glyma.04G039900 1.0kb downstream 1.0kb downstream 2572 true Chr04: 3205527-3208098 Glycine max
Glyma.04G039900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3205527-3206526 Glycine max
Glyma.04G039900 2.0kb upstream 2.0kb upstream 3572 true Chr04: 3206527-3210098 Glycine max
Glyma.04G039900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3208099-3210098 Glycine max
Glyma.04G039900 2.0kb downstream 2.0kb downstream 3572 true Chr04: 3204527-3208098 Glycine max
Glyma.04G039900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3204527-3206526 Glycine max
Glyma.04G039900 5.0kb upstream 5.0kb upstream 6572 true Chr04: 3206527-3213098 Glycine max
Glyma.04G039900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3208099-3213098 Glycine max
Glyma.04G039900 5.0kb downstream 5.0kb downstream 6572 true Chr04: 3201527-3208098 Glycine max
Glyma.04G039900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3201527-3206526 Glycine max
Glyma.04G039900 10.0kb upstream 10.0kb upstream 11572 true Chr04: 3206527-3218098 Glycine max
Glyma.04G039900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3208099-3218098 Glycine max
Glyma.04G039900 10.0kb downstream 10.0kb downstream 11572 true Chr04: 3196527-3208098 Glycine max
Glyma.04G039900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3196527-3206526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300600 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.030618 0.0 0.130478 Low  
cufflinks 0.133926 0.0 0.528875 Low  
cufflinks 152.344 0.0 494.548 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0897024 0.0 0.359252 Low  
cufflinks 6.69234 0.0 19.2022    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.207148 0.0 0.803843 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.72       High
cufflinks 0.177        
cufflinks 49.307     High High
cufflinks 0.032     Low  
cufflinks 0.081        
cufflinks 0.093        
cufflinks 0.145        
cufflinks 0.009     Low Low
cufflinks 0.939        
cufflinks 5.561       High
cufflinks 0.217        
cufflinks 0.045     Low  
cufflinks 0.063     Low  
cufflinks 7.03       High
cufflinks 0.234        
cufflinks 0.146        
cufflinks 0.108        

0 Strain