Gene : Glyma.04G039400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13375 - FMS INTERACTING PROTEIN Genomic Order:  394
Name:  ? Glyma.04G039400 Secondary Identifier:  ? PAC:30490074
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G039400 0.5kb upstream 0.5kb upstream 6003 true Chr04: 3120500-3126502 Glycine max
Glyma.04G039400 0.5kb upstream 0.5kb upstream 500 false Chr04: 3126003-3126502 Glycine max
Glyma.04G039400 0.5kb downstream 0.5kb downstream 6003 true Chr04: 3120000-3126002 Glycine max
Glyma.04G039400 0.5kb downstream 0.5kb downstream 500 false Chr04: 3120000-3120499 Glycine max
Glyma.04G039400 1.0kb upstream 1.0kb upstream 6503 true Chr04: 3120500-3127002 Glycine max
Glyma.04G039400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3126003-3127002 Glycine max
Glyma.04G039400 1.0kb downstream 1.0kb downstream 6503 true Chr04: 3119500-3126002 Glycine max
Glyma.04G039400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3119500-3120499 Glycine max
Glyma.04G039400 2.0kb upstream 2.0kb upstream 7503 true Chr04: 3120500-3128002 Glycine max
Glyma.04G039400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3126003-3128002 Glycine max
Glyma.04G039400 2.0kb downstream 2.0kb downstream 7503 true Chr04: 3118500-3126002 Glycine max
Glyma.04G039400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3118500-3120499 Glycine max
Glyma.04G039400 5.0kb upstream 5.0kb upstream 10503 true Chr04: 3120500-3131002 Glycine max
Glyma.04G039400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3126003-3131002 Glycine max
Glyma.04G039400 5.0kb downstream 5.0kb downstream 10503 true Chr04: 3115500-3126002 Glycine max
Glyma.04G039400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3115500-3120499 Glycine max
Glyma.04G039400 10.0kb upstream 10.0kb upstream 15503 true Chr04: 3120500-3136002 Glycine max
Glyma.04G039400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3126003-3136002 Glycine max
Glyma.04G039400 10.0kb downstream 10.0kb downstream 15503 true Chr04: 3110500-3126002 Glycine max
Glyma.04G039400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3110500-3120499 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307391 5265 Fabidae View MSA
124064206 5270 Rosid View MSA
123737010 5271 Pentapetalae View MSA
122786339 5272 Eudicot View MSA
122045756 5273 Angiosperm View MSA
121346778 5274 Embryophyte View MSA
123425483 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.73967 0.0 17.1649    
cufflinks 4.96869 0.0 17.8296    
cufflinks 3.53626 0.0 13.442   Low
cufflinks 5.49776 0.0 19.4998    
cufflinks 5.35695 0.0 19.008    
cufflinks 5.92864 0.0 20.7442   High
cufflinks 5.97215 0.0 18.0952   High
cufflinks 4.45673 0.0 16.377    
cufflinks 4.14909 0.0 15.2586    
cufflinks 2.192        
cufflinks 0.76       Low
cufflinks 1.682        
cufflinks 2.392        
cufflinks 2.861       High
cufflinks 0.85       Low
cufflinks 2.036        
cufflinks 0.725       Low
cufflinks 1.742        
cufflinks 2.342        
cufflinks 1.911        
cufflinks 0.906       Low
cufflinks 1.964        
cufflinks 2.359        
cufflinks 1.115        
cufflinks 1.704        
cufflinks 1.011        

0 Strain