Gene : Glyma.04G039600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10015:SF159 - HEAT STRESS TRANSCRIPTION FACTOR B-4 Genomic Order:  396
Name:  ? Glyma.04G039600 Secondary Identifier:  ? PAC:30487602
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G039600 0.5kb upstream 0.5kb upstream 4007 true Chr04: 3150370-3154376 Glycine max
Glyma.04G039600 0.5kb upstream 0.5kb upstream 500 false Chr04: 3153877-3154376 Glycine max
Glyma.04G039600 0.5kb downstream 0.5kb downstream 4007 true Chr04: 3149870-3153876 Glycine max
Glyma.04G039600 0.5kb downstream 0.5kb downstream 500 false Chr04: 3149870-3150369 Glycine max
Glyma.04G039600 1.0kb upstream 1.0kb upstream 4507 true Chr04: 3150370-3154876 Glycine max
Glyma.04G039600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3153877-3154876 Glycine max
Glyma.04G039600 1.0kb downstream 1.0kb downstream 4507 true Chr04: 3149370-3153876 Glycine max
Glyma.04G039600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3149370-3150369 Glycine max
Glyma.04G039600 2.0kb upstream 2.0kb upstream 5507 true Chr04: 3150370-3155876 Glycine max
Glyma.04G039600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3153877-3155876 Glycine max
Glyma.04G039600 2.0kb downstream 2.0kb downstream 5507 true Chr04: 3148370-3153876 Glycine max
Glyma.04G039600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3148370-3150369 Glycine max
Glyma.04G039600 5.0kb upstream 5.0kb upstream 8507 true Chr04: 3150370-3158876 Glycine max
Glyma.04G039600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3153877-3158876 Glycine max
Glyma.04G039600 5.0kb downstream 5.0kb downstream 8507 true Chr04: 3145370-3153876 Glycine max
Glyma.04G039600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3145370-3150369 Glycine max
Glyma.04G039600 10.0kb upstream 10.0kb upstream 13507 true Chr04: 3150370-3163876 Glycine max
Glyma.04G039600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3153877-3163876 Glycine max
Glyma.04G039600 10.0kb downstream 10.0kb downstream 13507 true Chr04: 3140370-3153876 Glycine max
Glyma.04G039600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3140370-3150369 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300682 5265 Fabidae View MSA
124067308 5270 Rosid View MSA
123751235 5271 Pentapetalae View MSA
122790497 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0348935 0.0 0.156937 Low Low
cufflinks 9.48518 0.0 36.5245    
cufflinks 0.417682 0.0 2.07412    
cufflinks 1.87078 0.0 7.48989    
cufflinks 3.3545 0.0 11.2522    
cufflinks 0.800184 0.0 3.70004    
cufflinks 10.0527 0.0 37.8121    
cufflinks 14.6064 0.0 52.4072   High
cufflinks 3.06244 0.0 14.4256    
cufflinks 1.783       High
cufflinks 0.022     Low Low
cufflinks 0.296        
cufflinks 0.532        
cufflinks 0.431        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.503        
cufflinks 0.117        
cufflinks 0.535        
cufflinks 1.553       High
cufflinks 0.453        
cufflinks 0.097       Low
cufflinks 0.552        
cufflinks 0.739        
cufflinks 0.103       Low
cufflinks 0.317        
cufflinks 0.158        

0 Strain