Gene : Glyma.04G038900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10438:SF229 - THIOREDOXIN-LIKE 4, CHLOROPLASTIC Genomic Order:  389
Name:  ? Glyma.04G038900 Secondary Identifier:  ? PAC:30490542
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G038900 0.5kb upstream 0.5kb upstream 3488 true Chr04: 3085350-3088837 Glycine max
Glyma.04G038900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3085350-3085849 Glycine max
Glyma.04G038900 0.5kb downstream 0.5kb downstream 3488 true Chr04: 3085850-3089337 Glycine max
Glyma.04G038900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3088838-3089337 Glycine max
Glyma.04G038900 1.0kb upstream 1.0kb upstream 3988 true Chr04: 3084850-3088837 Glycine max
Glyma.04G038900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3084850-3085849 Glycine max
Glyma.04G038900 1.0kb downstream 1.0kb downstream 3988 true Chr04: 3085850-3089837 Glycine max
Glyma.04G038900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3088838-3089837 Glycine max
Glyma.04G038900 2.0kb upstream 2.0kb upstream 4988 true Chr04: 3083850-3088837 Glycine max
Glyma.04G038900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3083850-3085849 Glycine max
Glyma.04G038900 2.0kb downstream 2.0kb downstream 4988 true Chr04: 3085850-3090837 Glycine max
Glyma.04G038900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3088838-3090837 Glycine max
Glyma.04G038900 5.0kb upstream 5.0kb upstream 7988 true Chr04: 3080850-3088837 Glycine max
Glyma.04G038900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3080850-3085849 Glycine max
Glyma.04G038900 5.0kb downstream 5.0kb downstream 7988 true Chr04: 3085850-3093837 Glycine max
Glyma.04G038900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3088838-3093837 Glycine max
Glyma.04G038900 10.0kb upstream 10.0kb upstream 12988 true Chr04: 3075850-3088837 Glycine max
Glyma.04G038900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3075850-3085849 Glycine max
Glyma.04G038900 10.0kb downstream 10.0kb downstream 12988 true Chr04: 3085850-3098837 Glycine max
Glyma.04G038900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3088838-3098837 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309782 5265 Fabidae View MSA
124065486 5270 Rosid View MSA
123744496 5271 Pentapetalae View MSA
122794437 5272 Eudicot View MSA
122048480 5273 Angiosperm View MSA
121346716 5274 Embryophyte View MSA
123427646 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.10335 0.0 23.2327   High
cufflinks 5.81479 0.0 25.0978   High
cufflinks 1.65475 0.0 10.7484    
cufflinks 2.36389 0.0 14.2068    
cufflinks 1.20663 0.0 8.46512    
cufflinks 1.35774 0.0 9.10974    
cufflinks 1.35383 0.0 7.85354    
cufflinks 1.73653 0.0 11.6322    
cufflinks 0.468578 0.0 3.77528   Low
cufflinks 2.136       High
cufflinks 0.179        
cufflinks 0.822        
cufflinks 0.215        
cufflinks 0.172        
cufflinks 0.048     Low Low
cufflinks 1.676        
cufflinks 0.143        
cufflinks 0.869        
cufflinks 1.584        
cufflinks 1.991       High
cufflinks 0.159        
cufflinks 1.94       High
cufflinks 2.052       High
cufflinks 0.14       Low
cufflinks 2.169       High
cufflinks 0.211        

0 Strain